NM_014140.4(SMARCAL1):c.1786G>A (p.Ala596Thr) AND not provided

Clinical significance:Uncertain significance (Last evaluated: Oct 20, 2014)

Review status:1 star out of maximum of 4 stars

criteria provided, single submitter

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000174124.1

Allele description [Variation Report for NM_014140.4(SMARCAL1):c.1786G>A (p.Ala596Thr)]

NM_014140.4(SMARCAL1):c.1786G>A (p.Ala596Thr)

Gene:
SMARCAL1:SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q35
Genomic location:
Preferred name:
NM_014140.4(SMARCAL1):c.1786G>A (p.Ala596Thr)
HGVS:
  • NC_000002.12:g.216447093G>A
  • NG_009771.1:g.39680G>A
  • NM_001127207.2:c.1786G>A
  • NM_014140.3:c.1786G>A
  • NM_014140.4:c.1786G>AMANE SELECT
  • NP_001120679.1:p.Ala596Thr
  • NP_054859.2:p.Ala596Thr
  • NP_054859.2:p.Ala596Thr
  • LRG_108t1:c.1786G>A
  • LRG_108:g.39680G>A
  • LRG_108p1:p.Ala596Thr
  • NC_000002.11:g.217311816G>A
Protein change:
A596T
Links:
dbSNP: rs143100109
NCBI 1000 Genomes Browser:
rs143100109
Molecular consequence:
  • NM_001127207.2:c.1786G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_014140.3:c.1786G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_014140.4:c.1786G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000225369EGL Genetic Diagnostics, Eurofins Clinical Diagnosticscriteria provided, single submitter
Uncertain significance
(Oct 20, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Details of each submission

From EGL Genetic Diagnostics, Eurofins Clinical Diagnostics, SCV000225369.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

Last Updated: Oct 25, 2021

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