NM_000525.4(KCNJ11):c.678C>T (p.Pro226=) AND not specified

Germline classification:: Benign/Likely benign (3 submissions)
Last evaluated:: Apr 23, 2024
Review status:: 2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000173150.9

Allele description [Variation Report for NM_000525.4(KCNJ11):c.678C>T (p.Pro226=)]

NM_000525.4(KCNJ11):c.678C>T (p.Pro226=)

Gene:

KCNJ11:potassium inwardly rectifying channel subfamily J member 11 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

11p15.1

Genomic location:

Preferred name:

NM_000525.4(KCNJ11):c.678C>T (p.Pro226=)

HGVS:

NC_000011.10:g.17387414G>A
NG_012446.1:g.6246C>T
NM_000525.4:c.678C>TMANE SELECT
NM_001166290.2:c.417C>T
NM_001377296.1:c.417C>T
NM_001377297.1:c.417C>T
NP_000516.3:p.Pro226=
NP_000516.3:p.Pro226=
NP_001159762.1:p.Pro139=
NP_001364225.1:p.Pro139=
NP_001364226.1:p.Pro139=
NC_000011.9:g.17408961G>A
NM_000525.3:c.678C>T
p.Pro226Pro

Links:

dbSNP: rs74162102

NCBI 1000 Genomes Browser:

rs74162102

Molecular consequence:

NM_000525.4:c.678C>T - synonymous variant - [Sequence Ontology: SO:0001819]
NM_001166290.2:c.417C>T - synonymous variant - [Sequence Ontology: SO:0001819]
NM_001377296.1:c.417C>T - synonymous variant - [Sequence Ontology: SO:0001819]
NM_001377297.1:c.417C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000595315	Genetic Services Laboratory, University of Chicago	criteria provided, single submitter (ACMG Guidelines, 2015)	Likely benign (Dec 24, 2015)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]
SCV000613865	Athena Diagnostics	criteria provided, single submitter (Athena Diagnostics Criteria)	Likely benign (Jun 26, 2017)	germline	clinical testing	PubMed (2) [See all records that cite these PMIDs] 22512215, 26467025
SCV005076658	Women's Health and Genetics/Laboratory Corporation of America, LabCorp	criteria provided, single submitter (LabCorp Variant Classification Summary - May 2015)	Benign (Apr 23, 2024)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000595315

Genetic Services Laboratory, University of Chicago

criteria provided, single submitter

(ACMG Guidelines, 2015)

Likely benign
(Dec 24, 2015)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000613865

Athena Diagnostics

criteria provided, single submitter

(Athena Diagnostics Criteria)

Likely benign
(Jun 26, 2017)

germline

clinical testing

PubMed (2)
[See all records that cite these PMIDs]

SCV005076658

Women's Health and Genetics/Laboratory Corporation of America, LabCorp

criteria provided, single submitter

(LabCorp Variant Classification Summary - May 2015)

Benign
(Apr 23, 2024)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing
not provided	germline	no	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]

PMID:: 25741868
PMCID:: PMC4544753

Association of the KCNJ11 variant E23K with type 2 diabetes in Indo-Trinidadians.

Boodram LG, Miyake K, Hayes MG, Bell GI, Cockburn BN.

West Indian Med J. 2011 Dec;60(6):604-7.

PubMed [citation]

PMID:: 22512215

See all PubMed Citations (3)

Details of each submission

From Genetic Services Laboratory, University of Chicago, SCV000595315.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	no	not provided	not provided	not provided		not provided	not provided	not provided	not provided

From Athena Diagnostics, SCV000613865.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (2)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV005076658.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 13, 2025

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