NM_025243.3(SLC19A3):c.435C>T (p.Ser145=) AND not provided

replaced

Germline classification:: Benign (1 submission)
Last evaluated:: Feb 9, 2014
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000128060.1

Allele description

NM_025243.3(SLC19A3):c.435C>T (p.Ser145=)

Gene:

SLC19A3:solute carrier family 19 (thiamine transporter), member 3 [Gene - OMIM]

Variant type:

single nucleotide variant

Cytogenetic location:

2q36.3

Genomic location:

Preferred name:

NM_025243.3(SLC19A3):c.435C>T (p.Ser145=)

HGVS:

NC_000002.12:g.227699280G>A
NG_016359.1:g.23750C>T
NM_025243.3:c.435C>T
NP_079519.1:p.Ser145=
NC_000002.11:g.228563996G>A
p.S145S:AGC>AGT

Links:

dbSNP: rs76517176

GMAF:

0.0465(A), 76517176

NCBI 1000 Genomes Browser:

rs76517176

Allele Frequency:

0.0468, GO-ESP

Molecular consequence:

NM_025243.3:c.435C>T - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Identifiers:: MedGen: CN221809

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000171651	GeneDx	criteria provided, single submitter (GeneDx Variant Classification (06012015))	Benign (Feb 9, 2014)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000171651

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification (06012015))

Benign
(Feb 9, 2014)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV000171651.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The variant is found in MITONUC-MITOP panel(s).

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 1, 2015

ClinVar

Relating variation to medicine