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NM_000086.2(CLN3):c.1210C>A (p.His404Asn) AND not provided

Germline classification:
Benign (1 submission)
Last evaluated:
Oct 22, 2013
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000124318.1

Allele description

NM_000086.2(CLN3):c.1210C>A (p.His404Asn)

Gene:
CLN3:ceroid-lipofuscinosis, neuronal 3 [Gene - OMIM]
Variant type:
single nucleotide variant
Cytogenetic location:
16p12.1
Genomic location:
Preferred name:
NM_000086.2(CLN3):c.1210C>A (p.His404Asn)
HGVS:
  • NC_000016.10:g.28477623G>T
  • NG_008654.2:g.19680C>A
  • NM_000086.2:c.1210C>A
  • NM_001042432.1:c.1210C>A
  • NP_000077.1:p.His404Asn
  • NP_001035897.1:p.His404Asn
  • NC_000016.9:g.28488944G>T
  • p.H404N:CAC>AAC
Protein change:
H404N
Links:
dbSNP: rs146610181
GMAF:
0.0108(T), 146610181
NCBI 1000 Genomes Browser:
rs146610181
Allele Frequency:
0.0082, GO-ESP
Molecular consequence:
  • NM_000086.2:c.1210C>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001310136.1:c.121-10721C>A - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:
Not Provided
Identifiers:
MedGen: CN221809

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000167746GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Benign
(Oct 22, 2013)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000167746.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The variant is found in EPILEPSY,INFANT-EPI,CHILD-EPI panel(s).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Aug 2, 2015