NM_000548.5(TSC2):c.2545+26G>A AND Tuberous sclerosis syndrome

Clinical significance:not provided

Review status:(0/4) 0 stars out of maximum of 4 stars

no assertion provided

Based on:
1 submission [Details]
Record status:
current
Accession:
RCV000042888.3

Allele description [Variation Report for NM_000548.5(TSC2):c.2545+26G>A]

NM_000548.5(TSC2):c.2545+26G>A

Gene:
TSC2:TSC complex subunit 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p13.3
Genomic location:
Preferred name:
NM_000548.5(TSC2):c.2545+26G>A
HGVS:
  • NC_000016.10:g.2074415G>A
  • NG_005895.1:g.30110G>A
  • NM_000548.5:c.2545+26G>AMANE SELECT
  • NM_001077183.3:c.2545+26G>A
  • NM_001114382.3:c.2545+26G>A
  • NM_001318827.2:c.2434+26G>A
  • NM_001318829.2:c.2398+26G>A
  • NM_001318831.2:c.1945+26G>A
  • NM_001318832.2:c.2578+26G>A
  • NM_001363528.2:c.2545+26G>A
  • NM_001370404.1:c.2545+26G>A
  • NM_001370405.1:c.2545+26G>A
  • NM_021055.3:c.2545+26G>A
  • LRG_487t1:c.2545+26G>A
  • LRG_487:g.30110G>A
  • NC_000016.9:g.2124416G>A
  • NM_000548.3:c.2545+26G>A
  • p.(=)
Links:
Tuberous sclerosis database (TSC2): TSC2_00468; dbSNP: rs45517242
NCBI 1000 Genomes Browser:
rs45517242
Molecular consequence:
  • NM_000548.5:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001077183.3:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001114382.3:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001318827.2:c.2434+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001318829.2:c.2398+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001318831.2:c.1945+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001318832.2:c.2578+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001363528.2:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001370404.1:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001370405.1:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_021055.3:c.2545+26G>A - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
Tuberous sclerosis syndrome (TSC)
Synonyms:
Tuberous sclerosis
Identifiers:
MedGen: C0041341; OMIM: PS191100

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000066684Tuberous sclerosis database (TSC2)no assertion provided
not providedgermlinecuration

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes6not providednot providednot providednot providedcuration

Citations

PubMed

Functional assessment of variants in the TSC1 and TSC2 genes identified in individuals with Tuberous Sclerosis Complex.

Hoogeveen-Westerveld M, Wentink M, van den Heuvel D, Mozaffari M, Ekong R, Povey S, den Dunnen JT, Metcalfe K, Vallee S, Krueger S, Bergoffen J, Shashi V, Elmslie F, Kwiatkowski D, Sampson J, Vidales C, Dzarir J, Garcia-Planells J, Dies K, Maat-Kievit A, van den Ouweland A, Halley D, et al.

Hum Mutat. 2011 Apr;32(4):424-35. doi: 10.1002/humu.21451. Epub 2011 Mar 8.

PubMed [citation]
PMID:
21309039

Details of each submission

From Tuberous sclerosis database (TSC2), SCV000066684.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcuration PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 27, 2021

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