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NM_000368.5(TSC1):c.671T>G (p.Met224Arg) AND Tuberous sclerosis syndrome

Germline classification:
not provided (1 submission)
Review status:
no classification provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000042336.2

Allele description [Variation Report for NM_000368.5(TSC1):c.671T>G (p.Met224Arg)]

NM_000368.5(TSC1):c.671T>G (p.Met224Arg)

Gene:
TSC1:TSC complex subunit 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.13
Genomic location:
Preferred name:
NM_000368.5(TSC1):c.671T>G (p.Met224Arg)
HGVS:
  • NC_000009.12:g.132921429A>C
  • NG_012386.1:g.28205T>G
  • NM_000368.5:c.671T>GMANE SELECT
  • NM_001162426.2:c.671T>G
  • NM_001162427.2:c.518T>G
  • NM_001362177.2:c.308T>G
  • NP_000359.1:p.Met224Arg
  • NP_000359.1:p.Met224Arg
  • NP_001155898.1:p.Met224Arg
  • NP_001155899.1:p.Met173Arg
  • NP_001349106.1:p.Met103Arg
  • LRG_486t1:c.671T>G
  • LRG_486:g.28205T>G
  • LRG_486p1:p.Met224Arg
  • NC_000009.11:g.135796816A>C
  • NM_000368.3:c.671T>G
  • NM_000368.4:c.671T>G
  • Q92574:p.Met224Arg
  • p.(Met224Arg)
Protein change:
M103R; MET224ARG
Links:
Tuberous sclerosis database (TSC1): TSC1_00036; UniProtKB: Q92574#VAR_009401; OMIM: 605284.0008; dbSNP: rs118203426
NCBI 1000 Genomes Browser:
rs118203426
Molecular consequence:
  • NM_000368.5:c.671T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001162426.2:c.671T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001162427.2:c.518T>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001362177.2:c.308T>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Tuberous sclerosis syndrome (TSC)
Synonyms:
Tuberous sclerosis
Identifiers:
MONDO: MONDO:0001734; MedGen: C0041341; OMIM: PS191100

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000066125Tuberous sclerosis database (TSC1)
no classification provided

(Tuberous Sclerosis Database Assertion Criteria 2015)
not providedgermlinecuration

PubMed (4)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedcuration

Citations

PubMed

Mutational spectrum of the TSC1 gene in a cohort of 225 tuberous sclerosis complex patients: no evidence for genotype-phenotype correlation.

van Slegtenhorst M, Verhoef S, Tempelaars A, Bakker L, Wang Q, Wessels M, Bakker R, Nellist M, Lindhout D, Halley D, van den Ouweland A.

J Med Genet. 1999 Apr;36(4):285-9.

PubMed [citation]
PMID:
10227394
PMCID:
PMC1734341

Overlapping neurologic and cognitive phenotypes in patients with TSC1 or TSC2 mutations.

Jansen FE, Braams O, Vincken KL, Algra A, Anbeek P, Jennekens-Schinkel A, Halley D, Zonnenberg BA, van den Ouweland A, van Huffelen AC, van Nieuwenhuizen O, Nellist M.

Neurology. 2008 Mar 18;70(12):908-15. Epub 2007 Nov 21.

PubMed [citation]
PMID:
18032745
See all PubMed Citations (4)

Details of each submission

From Tuberous sclerosis database (TSC1), SCV000066125.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcuration PubMed (4)

Description

Definite TSC

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024