NM_001267550.2(TTN):c.35037G>A (p.Pro11679=) AND not specified

Clinical significance:Likely benign (Last evaluated: Jun 6, 2017)

Review status:2 stars out of maximum of 4 stars

criteria provided, multiple submitters, no conflicts

Based on:
2 submissions [Details]
Record status:
current
Accession:
RCV000040182.7

Allele description [Variation Report for NM_001267550.2(TTN):c.35037G>A (p.Pro11679=)]

NM_001267550.2(TTN):c.35037G>A (p.Pro11679=)

Gene:
TTN:titin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q31.2
Genomic location:
Preferred name:
NM_001267550.2(TTN):c.35037G>A (p.Pro11679=)
HGVS:
  • NC_000002.12:g.178672161C>T
  • NG_011618.3:g.163642G>A
  • NM_001256850.1:c.33915G>A
  • NM_001267550.2:c.35037G>AMANE SELECT
  • NM_003319.4:c.13283-29844G>A
  • NM_133378.4:c.31134G>A
  • NM_133432.3:c.13658-29844G>A
  • NM_133437.4:c.13859-29844G>A
  • NP_001243779.1:p.Pro11305=
  • NP_001254479.2:p.Pro11679=
  • NP_596869.4:p.Pro10378=
  • LRG_391:g.163642G>A
  • NC_000002.11:g.179536888C>T
  • c.31134G>A
  • p.Pro10378Pro
Links:
dbSNP: rs369095270
NCBI 1000 Genomes Browser:
rs369095270
Molecular consequence:
  • NM_003319.4:c.13283-29844G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_133432.3:c.13658-29844G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_133437.4:c.13859-29844G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001256850.1:c.33915G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_001267550.2:c.35037G>A - synonymous variant - [Sequence Ontology: SO:0001819]
  • NM_133378.4:c.31134G>A - synonymous variant - [Sequence Ontology: SO:0001819]
Observations:
2

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000063873Laboratory for Molecular Medicine, Partners HealthCare Personalized Medicinecriteria provided, single submitter
Likely benign
(Feb 6, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000515425GeneDxcriteria provided, single submitter
Likely benign
(Jun 6, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing
not providedgermlinenot provided22not providednot providednot providedclinical testing

Citations

PubMed

A systematic approach to assessing the clinical significance of genetic variants.

Duzkale H, Shen J, McLaughlin H, Alfares A, Kelly MA, Pugh TJ, Funke BH, Rehm HL, Lebo MS.

Clin Genet. 2013 Nov;84(5):453-63. doi: 10.1111/cge.12257.

PubMed [citation]
PMID:
24033266
PMCID:
PMC3995020

Details of each submission

From Laboratory for Molecular Medicine, Partners HealthCare Personalized Medicine, SCV000063873.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedclinical testing PubMed (1)

Description

p.Pro10378Pro in exon 150 of TTN: This variant is not expected to have clinical significance because it does not alter an amino acid residue and it is not locat ed within the splice consensus sequence. It has been identified in 0.1% (12/1263 6) of South Asian chromosomes by the Exome Aggregation Consortium (ExAC, http:// exac.broadinstitute.org; dbSNP rs369095270).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot provided2not provided2not provided

From GeneDx, SCV000515425.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 7, 2021

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