- This record was updated by the submitter. Please see the current version.
NM_007294.3(BRCA1):c.66_67AG[1] (p.Glu23fs) AND Breast-ovarian cancer, familial 1
- Germline classification:
- Pathogenic (16 submissions)
- Last evaluated:
- Apr 22, 2016
- Review status:
- 3 stars out of maximum of 4 starsreviewed by expert panel
- Somatic classification
of clinical impact: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Somatic classification
of oncogenicity: - None
- Review status:
- (0/4) 0 stars out of maximum of 4 starsno assertion criteria provided
- Record status:
- current
- Accession:
- RCV000019230.19
Allele description
NM_007294.3(BRCA1):c.66_67AG[1] (p.Glu23fs)
- Gene:
- BRCA1:BRCA1 DNA repair associated [Gene - OMIM - HGNC]
- Variant type:
- Microsatellite
- Cytogenetic location:
- 17q21.31
- Genomic location:
- Preferred name:
- NM_007294.3(BRCA1):c.66_67AG[1] (p.Glu23fs)
- Other names:
- 185_186delAG
- HGVS:
- NC_000017.11:g.43124028_43124029CT[1]
- NC_000017.11:g.43124030_43124031del
- NG_005905.2:g.93953_93954AG[1]
- NM_007294.3:c.66_67AG[1]
- NM_007294.3:c.68_69delAG
- NM_007297.4:c.-22_-21AG[1]
- NM_007298.3:c.66_67AG[1]
- NM_007299.4:c.66_67AG[1]
- NM_007300.4:c.66_67AG[1]
- NP_009225.1:p.Glu23fs
- NP_009229.2:p.Glu23fs
- NP_009230.2:p.Glu23fs
- NP_009231.2:p.Glu23fs
- LRG_292t1:c.68_69del
- LRG_292:g.93953_93954del
- LRG_292p1:p.Glu23fs
- NC_000017.10:g.41276045_41276046CT[1]
- NC_000017.10:g.41276047_41276048delCT
- NM_007294.3:c.66_67delAG
- NM_007299.3:c.68_69delAG
- NM_007300.3:c.66_67delAG
- NM_007300.3:c.68_69del
- NR_027676.1:n.227_228AG[1]
- U14680.1:c.66_67del
- U14680.1:n.185_186delAG
- p.E23VFS*17
- p.E23VfsX17
- p.Glu23Valfs*17
- p.Glu23ValfsX17
- p.Glu23fs
- NM_007294.3:c.68_69delAG(185delAGor187delAG)
- NR_027676.1:c.229_230delAG
This HGVS expression did not pass validation- Nucleotide change:
- 185delAG
- Links:
- Breast Cancer Information Core (BIC) (BRCA1): 185&base_change=del AG; OMIM: 113705.0003; dbSNP: rs80357914
- NCBI 1000 Genomes Browser:
- rs80357914
- Molecular consequence:
- NM_007297.4:c.-22_-21AG[1] - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
- NM_007298.3:c.66_67AG[1] - frameshift variant - [Sequence Ontology: SO:0001589]
- NM_007299.4:c.66_67AG[1] - frameshift variant - [Sequence Ontology: SO:0001589]
- NM_007300.4:c.66_67AG[1] - frameshift variant - [Sequence Ontology: SO:0001589]
- Functional consequence:
- loss_of_function_variant [Sequence Ontology: SO:0002054]
- Observations:
- 2129
Condition(s)
- Name:
- Breast-ovarian cancer, familial 1 (BROVCA1)
- Synonyms:
- BREAST-OVARIAN CANCER, FAMILIAL, SUSCEPTIBILITY TO, 1; OVARIAN CANCER, SUSCEPTIBILITY TO; BREAST CANCER, FAMILIAL, SUSCEPTIBILITY TO, 1; See all synonyms [MedGen]
- Identifiers:
- MedGen: C2676676; Orphanet: 145; OMIM: 604370
Assertion and evidence details
Submission Accession | Submitter | Review Status (Assertion method) | Clinical Significance (Last evaluated) | Origin | Method | Citations |
---|---|---|---|---|---|---|
SCV000039518 | OMIM | no assertion criteria provided | Pathogenic (Oct 1, 2008) | germline | literature only | |
SCV000053880 | Sharing Clinical Reports Project (SCRP) | no assertion criteria provided | Pathogenic (Nov 14, 2013) | germline | clinical testing | |
SCV000144169 | Breast Cancer Information Core (BIC) (BRCA1) | no assertion criteria provided | Pathogenic (May 29, 2002) | germline, unknown | clinical testing | PubMed (2) Family is not Ashkenazi Jewish., |
SCV000189887 | Pathway Genomics | no assertion criteria provided | Pathogenic (Jul 24, 2014) | germline | clinical testing | |
SCV000195875 | Michigan Medical Genetics Laboratories,University of Michigan | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Nov 3, 2014) | germline | clinical testing | |
SCV000220360 | Counsyl | criteria provided, single submitter (Counsyl Autosomal Dominant Disease Classification criteria (2015)) | Pathogenic (May 30, 2014) | unknown | literature only | PubMed (5) Counsyl Autosomal Dominant Disease Classification criteria (2015), |
SCV000266036 | University of Washington Department of Laboratory Medicine,University of Washington | criteria provided, single submitter (Shirts et al. (Genet Med 2016)) | Pathogenic (Nov 20, 2015) | germline | clinical testing | |
SCV000282348 | Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA) | reviewed by expert panel (ENIGMA BRCA1/2 Classification Criteria (2015)) | Pathogenic (Apr 22, 2016) | germline | curation | ENIGMA BRCA1/2 Classification Criteria (2015), |
SCV000326390 | Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA), c/o University of Cambridge | criteria provided, single submitter (CIMBA Mutation Classification guidelines May 2016) | Pathogenic (Oct 2, 2015) | germline | clinical testing | CIMBA_Mutation_Classification_guidelines_May16.pdf, |
SCV000564332 | Department of Medical Genetics,Oslo University Hospital | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Jul 1, 2015) | germline | clinical testing | |
SCV000577914 | Genologica Medica
| criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Jan 1, 2017) | germline | clinical testing | |
SCV000583605 | Bioinformatics dept.,Datar Cancer Genetics Limited, India | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Jul 14, 2017) | germline | clinical testing | |
SCV000593688 | Genetic Services Laboratory, University of Chicago | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Dec 2, 2016) | germline | clinical testing | |
SCV000733684 | Diagnostic Laboratory, Department of Genetics,University Medical Center Groningen - VKGL Data-share Consensus | no assertion criteria provided | Pathogenic | germline | clinical testing | |
SCV000746289 | Genomic Research Center,Shahid Beheshti University of Medical Sciences | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (Dec 3, 2017) | inherited | clinical testing | |
SCV000839891 | Human Genome Sequencing Center Clinical Lab,Baylor College of Medicine | criteria provided, single submitter (ACMG Guidelines, 2015) | Pathogenic (May 25, 2017) | germline | clinical testing |
Summary from all submissions
Ethnicity | Origin | Affected | Individuals | Families | Chromosomes tested | Number Tested | Family history | Method |
---|---|---|---|---|---|---|---|---|
not provided | germline | yes | 662 | not provided | not provided | 1 | not provided | clinical testing |
not provided | germline | no | 1 | not provided | not provided | 1 | not provided | clinical testing |
not provided | germline | not provided | 304 | not provided | not provided | 304 | not provided | literature only, clinical testing |
not provided | germline | unknown | not provided | 2127 | not provided | not provided | not provided | clinical testing, curation |
not provided | inherited | yes | not provided | not provided | not provided | not provided | not provided | clinical testing |
not provided | unknown | unknown | not provided | not provided | not provided | not provided | not provided | literature only |
African | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
African, Latin American, Caribbean | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi | germline | yes | 1078 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi | not provided | yes | 6 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi Jewish | germline | yes | 9 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Central/Eastern European | germline | yes | 31 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Central/Eastern European, Nea | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Dutch, Italian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Englishraine | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Greek | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Scandinavian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Sephardic | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Sephardic Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Western European | germline | yes | 5 | not provided | not provided | not provided | not provided | clinical testing |
Ashkenazi, Western, Central/Eastern European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Asian | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Asian, Ashkenazi, Western European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Asian, Indian | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Austrian, Jewish, Polish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Caucasian | germline | yes | 25 | not provided | not provided | not provided | not provided | clinical testing |
Caucasian | not provided | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Caucasian Non Hispanic | germline | yes | 7 | not provided | not provided | not provided | not provided | clinical testing |
Caucasian, Non Ashkenazi | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Causasians | germline | yes | not provided | 2 | not provided | not provided | yes | clinical testing |
Central/Eastern European | germline | yes | 17 | not provided | not provided | not provided | not provided | clinical testing |
Central/Eastern European, Russian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Central/Eastern European, Russian, Polish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Central/Eastern European, Turkish, Greek | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Chilean | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
English | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
English, Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Englishraine German | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Gypsy | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Indian | germline | yes | 3 | not provided | not provided | not provided | not provided | clinical testing |
Irish, German, Scottish, English, Welsh | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Jewish | germline | yes | 57 | not provided | not provided | not provided | not provided | clinical testing |
Jewish, Mixed | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Latin American, Caribbean | germline | yes | 21 | not provided | not provided | not provided | not provided | clinical testing |
Latin American, Caribbean, New Mexican | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Latvian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Mediterranean | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Mid, Near East | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Native American | germline | yes | 6 | not provided | not provided | not provided | not provided | clinical testing |
Native American, Western European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Near Eastern | germline | yes | 5 | not provided | not provided | not provided | not provided | clinical testing |
Near Eastern, Sephardic Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Patient Not Ashkenazi Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Romanian, Ashkenazi Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Romanian, Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Russian Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Russian, Ashkenazi Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Russian, Polish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
South Asian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Spanish | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Western European | germline | yes | 87 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Ashkenazi | germline | yes | 23 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Ashkenazi, Central, Eas | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Ashkenazi, Central/Eastern European, Polish, Austrian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Ashkenazi, English, Dutch | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Central/Eastern European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Danish, German, Neth | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, French | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, French Canadian | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, French, English, Irish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, French, Italian | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Western European, French, Spanish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Jewish | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Latin American, Caribbe | germline | yes | 2 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Native American, Centr | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Native American, Latin | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Near Eastern Mid Eastern | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western European, Spanish Mexican | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Western Europeanan, Central/Eastern European | germline | yes | 1 | not provided | not provided | not provided | not provided | clinical testing |
Citations
PubMed
Common origins of BRCA1 mutations in Canadian breast and ovarian cancer families.
Simard J, Tonin P, Durocher F, Morgan K, Rommens J, Gingras S, Samson C, Leblanc JF, Bélanger C, Dion F, et al.
Nat Genet. 1994 Dec;8(4):392-8.
- PMID:
- 7894492
Ashkenazi Jewish population frequencies for common mutations in BRCA1 and BRCA2.
Roa BB, Boyd AA, Volcik K, Richards CS.
Nat Genet. 1996 Oct;14(2):185-7.
- PMID:
- 8841191
Details of each submission
From OMIM, SCV000039518.4
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | literature only | PubMed (10) |
Description
Breast-Ovarian Cancer Susceptibility
Simard et al. (1994) studied 30 Canadian families with breast and/or ovarian cancer (604370) for germline mutations in the coding region of the BRCA1 candidate gene. They identified a 2-bp (AG185) deletion in the normal sequence TTA GAG of codons 22-23 in exon 3. The AGAG presumably predisposed to the deletion. This mutation changes the reading frame of the mRNA and causes a premature termination codon at position 39. This mutation was detected in index cases from 4 families that were not known to be related and originated from different areas in Canada. In these 4 families there were a total of 12 cases of breast cancer and 11 cases of ovarian cancer.
Struewing et al. (1995) pointed out that all 10 published families with the 185delAG mutation (also called 187delAG) were Ashkenazi Jewish (of Eastern European origin). They knew of an eleventh Ashkenazi breast/ovarian cancer family with the 185delAG mutation; furthermore, only 1 Ashkenazi Jewish family was known to have a BRCA1 mutation other than 185delAG. In addition, Ashkenazi families with the 185delAG mutation appeared to share a common haplotype. In a study of 858 Ashkenazim seeking genetic testing for conditions unrelated to cancer, they observed the 185delAG mutation in 0.9% (95% confidence limit, 0.4%-1.8%), and in 815 reference individuals not selected for ethnic origin, none had the mutation.
Roa et al. (1996) found the 185delAG mutation in 1.09% of approximately 3,000 Ashkenazi Jewish individuals and found the 5382insC mutation (113705.0018) in 0.13%. BRCA2 analysis on 3,085 individuals from the same population showed a carrier frequency of 1.52% for the 6174delT mutation (600185.0009). The expanded population-based study confirmed that the BRCA1 185delAG mutation and the BRCA2 6174delT mutation constituted the 2 most frequent mutant alleles predisposing to hereditary breast cancer among Ashkenazim and suggested a relatively lower penetrance for the 6174delT mutation in BRCA2.
Bar-Sade et al. (1997) examined 639 unrelated healthy Jews of Iraqi extraction, a presumed low-risk group for the 185delAG mutation which occurs predominantly in Ashkenazim. Three individuals were identified as 185delAG mutation carriers, and haplotype analysis of the Iraqi mutation carriers showed that 2 of the Iraqis shared a haplotype in common with 6 Ashkenazi mutation carriers, and a third had a haplotype that differed by a single marker. This suggested to Bar-Sade et al. (1997) that the BRCA1 185delAG mutation may have arisen before the dispersion of the Jewish people in the Diaspora, at least at the time of Christ.
Bar-Sade et al. (1998) extended their analyses to other non-Ashkenazi subsets: 354 of Moroccan origin, 200 Yemenites, and 150 Iranian Jews. Four of Moroccan origin (1.1%) and none of the Yemenites or Iranians were carriers of the 185delAG mutation. BRCA1 allelic patterns (haplotypes) were determined for 4 of these individuals and for 12 additional non-Ashkenazi 185delAG mutation carriers who had breast/ovarian cancer. The common 'Ashkenazi haplotype' was shared by 6 non-Ashkenazi individuals; 4 had a closely related pattern, and the rest (n = 6) displayed a distinct BRCA1 allelic pattern. The authors concluded that the 185delAG BRCA1 mutation occurs in some non-Ashkenazi populations at rates comparable with that of Ashkenazim. The majority of Jewish 185delAG mutation carriers have the same haplotype, supporting the founder effect notion, but dating the mutation's origin to an earlier date than previously estimated. The different allelic pattern at the BRCA1 locus in some Jewish mutation carriers might suggest that the mutation arose independently.
Bandera et al. (1998) demonstrated the 185delAG mutation in 2 women with a personal or family history of breast cancer and papillary serous carcinoma of the peritoneum (PSCP). PSCP is histologically indistinguishable from serous epithelial ovarian carcinoma and it may develop years after oophorectomy. Schorge et al. (1998) demonstrated that the tumors were multifocal in these cases, indicating that patients with germline BRCA1 mutations may develop PSCP in addition to breast and ovarian carcinomas.
Ah Mew et al. (2002) reported the 185delAG mutation in a non-Jewish Chilean family with no reported Jewish ancestry. The linked haplotype present in this family was identical to that identified in the Ashkenazi Jewish population.
Buisson et al. (2006) found that BRCA1 transcripts bearing the 185delAG mutation are not degraded by nonsense-mediated mRNA decay. Using Western blot analysis, they examined HeLa cells transfected with minigenes for this transcript and another with a premature termination codon at position 36 and found that translation from these transcripts was reinitiated at codon 128.
Pancreatic Cancer Susceptibility
Al-Sukhni et al. (2008) found loss of heterozygosity at the BRCA1 locus in pancreatic tumor DNA from 5 (71%) of 7 patients with pancreatic cancer (PNCA4; 614320) who carried a heterozygous germline BRCA1 mutation. Three patients carried the 185delAG mutation. In contrast, only 1 (11%) of 9 patients with sporadic pancreatic cancer and no germline BRCA1 mutations showed LOH at the BRCA1 locus. Al-Sukhni et al. (2008) concluded that BRCA1 germline mutations likely predispose to the development of pancreatic cancer, and suggested that individuals with these mutations be considered for pancreatic cancer-screening programs.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | not provided | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Sharing Clinical Reports Project (SCRP), SCV000053880.6
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | not provided | 304 | not provided | not provided | not provided | not provided | not provided | See 1 |
Co-occurrences
# | Zygosity | Alleles | Number of Observations |
---|---|---|---|
1 | SingleHeterozygote | BRCA2:6010G>A (E1928K) | 1 |
1 | SingleHeterozygote | BRCA2:6174delT | 2 |
From Breast Cancer Information Core (BIC) (BRCA1), SCV000144169.2
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 599 | not provided | not provided | clinical testing | PubMed (2) |
2 | not provided | 32 | not provided | not provided | clinical testing | PubMed (2) |
3 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
4 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
5 | not provided | 2 | not provided | not provided | clinical testing | PubMed (2) |
6 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
7 | not provided | 7 | not provided | not provided | clinical testing | PubMed (2) |
8 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
9 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
10 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
11 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
12 | not provided | 1 | not provided | not provided | clinical testing | PubMed (2) |
13 | African | 1 | not provided | not provided | clinical testing | PubMed (2) |
14 | African, Latin American, Caribbean | 1 | not provided | not provided | clinical testing | PubMed (2) |
15 | Ashkenazi | 1075 | not provided | not provided | clinical testing | PubMed (2) |
16 | Ashkenazi | 3 | not provided | not provided | clinical testing | PubMed (2) |
17 | Ashkenazi | 6 | not provided | not provided | clinical testing | PubMed (2) |
18 | Ashkenazi Jewish | 6 | not provided | not provided | clinical testing | PubMed (2) |
19 | Ashkenazi Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
20 | Ashkenazi Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
21 | Ashkenazi Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
22 | Ashkenazi, Central/Eastern European | 31 | not provided | not provided | clinical testing | PubMed (2) |
23 | Ashkenazi, Central/Eastern European, Nea | 1 | not provided | not provided | clinical testing | PubMed (2) |
24 | Ashkenazi, Dutch, Italian | 1 | not provided | not provided | clinical testing | PubMed (2) |
25 | Ashkenazi, Englishraine | 1 | not provided | not provided | clinical testing | PubMed (2) |
26 | Ashkenazi, Greek | 1 | not provided | not provided | clinical testing | PubMed (2) |
27 | Ashkenazi, Scandinavian | 1 | not provided | not provided | clinical testing | PubMed (2) |
28 | Ashkenazi, Sephardic | 2 | not provided | not provided | clinical testing | PubMed (2) |
29 | Ashkenazi, Sephardic Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
30 | Ashkenazi, Western European | 5 | not provided | not provided | clinical testing | PubMed (2) |
31 | Ashkenazi, Western, Central/Eastern European | 1 | not provided | not provided | clinical testing | PubMed (2) |
32 | Asian | 2 | not provided | not provided | clinical testing | PubMed (2) |
33 | Asian, Ashkenazi, Western European | 1 | not provided | not provided | clinical testing | PubMed (2) |
34 | Asian, Indian | 2 | not provided | not provided | clinical testing | PubMed (2) |
35 | Austrian, Jewish, Polish | 1 | not provided | not provided | clinical testing | PubMed (2) |
36 | Caucasian | 1 | not provided | not provided | clinical testing | PubMed (2) |
37 | Caucasian | 6 | not provided | not provided | clinical testing | PubMed (2) |
38 | Caucasian | 6 | not provided | not provided | clinical testing | PubMed (2) |
39 | Caucasian | 5 | not provided | not provided | clinical testing | PubMed (2) |
40 | Caucasian | 1 | not provided | not provided | clinical testing | PubMed (2) |
41 | Caucasian | 6 | not provided | not provided | clinical testing | PubMed (2) |
42 | Caucasian | 1 | not provided | not provided | clinical testing | PubMed (2) |
43 | Caucasian Non Hispanic | 7 | not provided | not provided | clinical testing | PubMed (2) |
44 | Caucasian, Non Ashkenazi | 1 | not provided | not provided | clinical testing | PubMed (2) |
45 | Central/Eastern European | 17 | not provided | not provided | clinical testing | PubMed (2) |
46 | Central/Eastern European, Russian | 1 | not provided | not provided | clinical testing | PubMed (2) |
47 | Central/Eastern European, Russian, Polish | 1 | not provided | not provided | clinical testing | PubMed (2) |
48 | Central/Eastern European, Turkish, Greek | 1 | not provided | not provided | clinical testing | PubMed (2) |
49 | Chilean | 1 | not provided | not provided | clinical testing | PubMed (2) |
50 | English | 1 | not provided | not provided | clinical testing | PubMed (2) |
51 | English, Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
52 | Englishraine German | 1 | not provided | not provided | clinical testing | PubMed (2) |
53 | Gypsy | 2 | not provided | not provided | clinical testing | PubMed (2) |
54 | Indian | 3 | not provided | not provided | clinical testing | PubMed (2) |
55 | Irish, German, Scottish, English, Welsh | 1 | not provided | not provided | clinical testing | PubMed (2) |
56 | Jewish | 54 | not provided | not provided | clinical testing | PubMed (2) |
57 | Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
58 | Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
59 | Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
60 | Jewish, Mixed | 1 | not provided | not provided | clinical testing | PubMed (2) |
61 | Latin American, Caribbean | 21 | not provided | not provided | clinical testing | PubMed (2) |
62 | Latin American, Caribbean, New Mexican | 1 | not provided | not provided | clinical testing | PubMed (2) |
63 | Latvian | 1 | not provided | not provided | clinical testing | PubMed (2) |
64 | Mediterranean | 1 | not provided | not provided | clinical testing | PubMed (2) |
65 | Mid, Near East | 2 | not provided | not provided | clinical testing | PubMed (2) |
66 | Native American | 6 | not provided | not provided | clinical testing | PubMed (2) |
67 | Native American, Western European | 1 | not provided | not provided | clinical testing | PubMed (2) |
68 | Near Eastern | 5 | not provided | not provided | clinical testing | PubMed (2) |
69 | Near Eastern, Sephardic Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
70 | Patient Not Ashkenazi Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
71 | Romanian, Ashkenazi Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
72 | Romanian, Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
73 | Russian Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
74 | Russian, Ashkenazi Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
75 | Russian, Polish | 1 | not provided | not provided | clinical testing | PubMed (2) |
76 | Spanish | 2 | not provided | not provided | clinical testing | PubMed (2) |
77 | Western European | 87 | not provided | not provided | clinical testing | PubMed (2) |
78 | Western European, Ashkenazi | 23 | not provided | not provided | clinical testing | PubMed (2) |
79 | Western European, Ashkenazi, Central, Eas | 1 | not provided | not provided | clinical testing | PubMed (2) |
80 | Western European, Ashkenazi, Central/Eastern European, Polish, Austrian | 1 | not provided | not provided | clinical testing | PubMed (2) |
81 | Western European, Ashkenazi, English, Dutch | 1 | not provided | not provided | clinical testing | PubMed (2) |
82 | Western European, Central/Eastern European | 1 | not provided | not provided | clinical testing | PubMed (2) |
83 | Western European, Danish, German, Neth | 1 | not provided | not provided | clinical testing | PubMed (2) |
84 | Western European, French | 1 | not provided | not provided | clinical testing | PubMed (2) |
85 | Western European, French Canadian | 1 | not provided | not provided | clinical testing | PubMed (2) |
86 | Western European, French, English, Irish | 1 | not provided | not provided | clinical testing | PubMed (2) |
87 | Western European, French, Italian | 2 | not provided | not provided | clinical testing | PubMed (2) |
88 | Western European, French, Spanish | 1 | not provided | not provided | clinical testing | PubMed (2) |
89 | Western European, Jewish | 1 | not provided | not provided | clinical testing | PubMed (2) |
90 | Western European, Latin American, Caribbe | 2 | not provided | not provided | clinical testing | PubMed (2) |
91 | Western European, Native American, Centr | 1 | not provided | not provided | clinical testing | PubMed (2) |
92 | Western European, Native American, Latin | 1 | not provided | not provided | clinical testing | PubMed (2) |
93 | Western European, Near Eastern Mid Eastern | 1 | not provided | not provided | clinical testing | PubMed (2) |
94 | Western European, Spanish Mexican | 1 | not provided | not provided | clinical testing | PubMed (2) |
95 | Western Europeanan, Central/Eastern European | 1 | not provided | not provided | clinical testing | PubMed (2) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 599 | not provided | not provided | not provided | |
2 | germline | yes | not provided | not provided | not provided | 32 | not provided | not provided | not provided | |
3 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
4 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
5 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
6 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
7 | germline | yes | not provided | not provided | not provided | 7 | not provided | not provided | not provided | |
8 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
9 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
10 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
11 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
12 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
13 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
14 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
15 | germline | yes | not provided | not provided | not provided | 1075 | not provided | not provided | not provided | |
16 | germline | yes | not provided | not provided | not provided | 3 | not provided | not provided | not provided | |
17 | unknown | yes | not provided | not provided | not provided | 6 | not provided | not provided | not provided | |
18 | germline | yes | not provided | not provided | not provided | 6 | not provided | not provided | not provided | |
19 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
20 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
21 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
22 | germline | yes | not provided | not provided | not provided | 31 | not provided | not provided | not provided | |
23 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
24 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
25 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
26 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
27 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
28 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
29 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
30 | germline | yes | not provided | not provided | not provided | 5 | not provided | not provided | not provided | |
31 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
32 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
33 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
34 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
35 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
36 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
37 | germline | yes | not provided | not provided | not provided | 6 | not provided | not provided | not provided | |
38 | germline | yes | not provided | not provided | not provided | 6 | not provided | not provided | not provided | |
39 | germline | yes | not provided | not provided | not provided | 5 | not provided | not provided | not provided | |
40 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
41 | germline | yes | not provided | not provided | not provided | 6 | not provided | not provided | not provided | |
42 | unknown | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
43 | germline | yes | not provided | not provided | not provided | 7 | not provided | not provided | not provided | |
44 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
45 | germline | yes | not provided | not provided | not provided | 17 | not provided | not provided | not provided | |
46 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
47 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
48 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
49 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
50 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
51 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
52 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
53 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
54 | germline | yes | not provided | not provided | not provided | 3 | not provided | not provided | not provided | |
55 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
56 | germline | yes | not provided | not provided | not provided | 54 | not provided | not provided | not provided | |
57 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
58 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
59 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
60 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
61 | germline | yes | not provided | not provided | not provided | 21 | not provided | not provided | not provided | |
62 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
63 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
64 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
65 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
66 | germline | yes | not provided | not provided | not provided | 6 | not provided | not provided | not provided | |
67 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
68 | germline | yes | not provided | not provided | not provided | 5 | not provided | not provided | not provided | |
69 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
70 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
71 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
72 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
73 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
74 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
75 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
76 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
77 | germline | yes | not provided | not provided | not provided | 87 | not provided | not provided | not provided | |
78 | germline | yes | not provided | not provided | not provided | 23 | not provided | not provided | not provided | |
79 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
80 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
81 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
82 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
83 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
84 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
85 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
86 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
87 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
88 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
89 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
90 | germline | yes | not provided | not provided | not provided | 2 | not provided | not provided | not provided | |
91 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
92 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
93 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
94 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided | |
95 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided |
From Pathway Genomics, SCV000189887.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (6) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Michigan Medical Genetics Laboratories,University of Michigan, SCV000195875.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | Blood | not provided | not provided | not provided | not provided | not provided |
From Counsyl, SCV000220360.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | literature only | PubMed (5) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | unknown | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From University of Washington Department of Laboratory Medicine,University of Washington, SCV000266036.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
2 | not provided | 1 | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | 1 | not provided | not provided | 1 | not provided | not provided | not provided | |
2 | germline | no | 1 | not provided | not provided | 1 | not provided | not provided | not provided |
From Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA), SCV000282348.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | curation | not provided |
Description
Variant allele predicted to encode a truncated non-functional protein.
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA), c/o University of Cambridge, SCV000326390.3
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | 2127 | not provided |
From Department of Medical Genetics,Oslo University Hospital, SCV000564332.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | 13 | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 13 | not provided | not provided | not provided |
From Genologica Medica, SCV000577914.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | Causasians | not provided | not provided | yes | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | Blood | not provided | not provided | not provided | 2 | not provided |
From Bioinformatics dept.,Datar Cancer Genetics Limited, India, SCV000583605.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | South Asian | 1 | not provided | not provided | clinical testing | PubMed (2) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | 1 | not provided | not provided | not provided |
From Genetic Services Laboratory, University of Chicago, SCV000593688.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Diagnostic Laboratory, Department of Genetics,University Medical Center Groningen - VKGL Data-share Consensus, SCV000733684.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | not provided |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Genomic Research Center,Shahid Beheshti University of Medical Sciences, SCV000746289.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | inherited | yes | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
From Human Genome Sequencing Center Clinical Lab,Baylor College of Medicine, SCV000839891.1
# | Ethnicity | Individuals | Chromosomes Tested | Family History | Method | Citations |
---|---|---|---|---|---|---|
1 | not provided | not provided | not provided | not provided | clinical testing | PubMed (1) |
Description
The c.68_69del (p.Glu23Valfs*17) variant in the BRCA1 gene has been detected multiple patients with breast cancer and/or ovarian cancer [PMID 14576434, 26718727, 21503673, 22430266, 23633455, 22752604, referred as c.185delAG in some publications]. This variant is a founder mutation in Ashkenazi Jews with a frequency of about 1% [PMID 14576434]. The variant has also been detected in patients with prostate [PMID 22516946] and pancreatic cancer [PMID 20711688, 24737347, 23658460, 26440929]. This one bp deletion in exon 2 results in a frameshift and the creation of a premature stop codon. Functional in vitro assays showed that this variant was deleterious [PMID 23867111]. This variant has been reported in 31 individuals from the ExAC database (http://exac.broadinstitute.org/variant/22-29091226-TA-T). This variant is thus classified as pathogenic
# | Sample | Method | Observation | |||||||
---|---|---|---|---|---|---|---|---|---|---|
Origin | Affected | Number tested | Tissue | Purpose | Method | Individuals | Allele frequency | Families | Co-occurrences | |
1 | germline | unknown | not provided | not provided | not provided | not provided | not provided | not provided | not provided |
Last Updated: Sep 23, 2019