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NM_007294.3(BRCA1):c.66_67AG[1] (p.Glu23fs) AND Breast-ovarian cancer, familial 1

Germline classification:
Pathogenic (16 submissions)
Last evaluated:
Apr 22, 2016
Review status:
3 stars out of maximum of 4 stars
reviewed by expert panel
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000019230.19

Allele description

NM_007294.3(BRCA1):c.66_67AG[1] (p.Glu23fs)

Gene:
BRCA1:BRCA1 DNA repair associated [Gene - OMIM - HGNC]
Variant type:
Microsatellite
Cytogenetic location:
17q21.31
Genomic location:
Preferred name:
NM_007294.3(BRCA1):c.66_67AG[1] (p.Glu23fs)
Other names:
185_186delAG
HGVS:
  • NC_000017.11:g.43124028_43124029CT[1]
  • NC_000017.11:g.43124030_43124031del
  • NG_005905.2:g.93953_93954AG[1]
  • NM_007294.3:c.66_67AG[1]
  • NM_007294.3:c.68_69delAG
  • NM_007297.4:c.-22_-21AG[1]
  • NM_007298.3:c.66_67AG[1]
  • NM_007299.4:c.66_67AG[1]
  • NM_007300.4:c.66_67AG[1]
  • NP_009225.1:p.Glu23fs
  • NP_009229.2:p.Glu23fs
  • NP_009230.2:p.Glu23fs
  • NP_009231.2:p.Glu23fs
  • LRG_292t1:c.68_69del
  • LRG_292:g.93953_93954del
  • LRG_292p1:p.Glu23fs
  • NC_000017.10:g.41276045_41276046CT[1]
  • NC_000017.10:g.41276047_41276048delCT
  • NM_007294.3:c.66_67delAG
  • NM_007299.3:c.68_69delAG
  • NM_007300.3:c.66_67delAG
  • NM_007300.3:c.68_69del
  • NR_027676.1:n.227_228AG[1]
  • U14680.1:c.66_67del
  • U14680.1:n.185_186delAG
  • p.E23VFS*17
  • p.E23VfsX17
  • p.Glu23Valfs*17
  • p.Glu23ValfsX17
  • p.Glu23fs
  • NM_007294.3:c.68_69delAG(185delAGor187delAG)
  • NR_027676.1:c.229_230delAG
Nucleotide change:
185delAG
Links:
Breast Cancer Information Core (BIC) (BRCA1): 185&base_change=del AG; OMIM: 113705.0003; dbSNP: rs80357914
NCBI 1000 Genomes Browser:
rs80357914
Molecular consequence:
  • NM_007297.4:c.-22_-21AG[1] - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_007298.3:c.66_67AG[1] - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_007299.4:c.66_67AG[1] - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_007300.4:c.66_67AG[1] - frameshift variant - [Sequence Ontology: SO:0001589]
Functional consequence:
loss_of_function_variant [Sequence Ontology: SO:0002054]
Observations:
2129

Condition(s)

Name:
Breast-ovarian cancer, familial 1 (BROVCA1)
Synonyms:
BREAST-OVARIAN CANCER, FAMILIAL, SUSCEPTIBILITY TO, 1; OVARIAN CANCER, SUSCEPTIBILITY TO; BREAST CANCER, FAMILIAL, SUSCEPTIBILITY TO, 1; See all synonyms [MedGen]
Identifiers:
MedGen: C2676676; Orphanet: 145; OMIM: 604370

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000039518OMIM
no assertion criteria provided
Pathogenic
(Oct 1, 2008)
germlineliterature only

PubMed (10)
[See all records that cite these PMIDs]

SCV000053880Sharing Clinical Reports Project (SCRP)
no assertion criteria provided
Pathogenic
(Nov 14, 2013)
germlineclinical testing

SCV000144169Breast Cancer Information Core (BIC) (BRCA1)
no assertion criteria provided
Pathogenic
(May 29, 2002)
germline, unknownclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Family is not Ashkenazi Jewish.,

SCV000189887Pathway Genomics
no assertion criteria provided
Pathogenic
(Jul 24, 2014)
germlineclinical testing

PubMed (6)
[See all records that cite these PMIDs]

SCV000195875Michigan Medical Genetics Laboratories,University of Michigan
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Nov 3, 2014)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000220360Counsyl
criteria provided, single submitter

(Counsyl Autosomal Dominant Disease Classification criteria (2015))
Pathogenic
(May 30, 2014)
unknownliterature only

PubMed (5)
[See all records that cite these PMIDs]

Counsyl Autosomal Dominant Disease Classification criteria (2015),

Citation Link,

SCV000266036University of Washington Department of Laboratory Medicine,University of Washington
criteria provided, single submitter

(Shirts et al. (Genet Med 2016))
Pathogenic
(Nov 20, 2015)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000282348Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA)
reviewed by expert panel

(ENIGMA BRCA1/2 Classification Criteria (2015))
Pathogenic
(Apr 22, 2016)
germlinecuration

ENIGMA BRCA1/2 Classification Criteria (2015),

Citation Link,

SCV000326390Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA), c/o University of Cambridge
criteria provided, single submitter

(CIMBA Mutation Classification guidelines May 2016)
Pathogenic
(Oct 2, 2015)
germlineclinical testing

CIMBA_Mutation_Classification_guidelines_May16.pdf,

Citation Link,

SCV000564332Department of Medical Genetics,Oslo University Hospital
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Jul 1, 2015)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000577914Genologica Medica

See additional submitters

criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Jan 1, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000583605Bioinformatics dept.,Datar Cancer Genetics Limited, India
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Jul 14, 2017)
germlineclinical testing

PubMed (2)
[See all records that cite these PMIDs]

SCV000593688Genetic Services Laboratory, University of Chicago
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Dec 2, 2016)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000733684Diagnostic Laboratory, Department of Genetics,University Medical Center Groningen - VKGL Data-share Consensus
no assertion criteria provided
Pathogenicgermlineclinical testing

SCV000746289Genomic Research Center,Shahid Beheshti University of Medical Sciences
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Dec 3, 2017)
inheritedclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV000839891Human Genome Sequencing Center Clinical Lab,Baylor College of Medicine
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(May 25, 2017)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes662not providednot provided1not providedclinical testing
not providedgermlineno1not providednot provided1not providedclinical testing
not providedgermlinenot provided304not providednot provided304not providedliterature only, clinical testing
not providedgermlineunknownnot provided2127not providednot providednot providedclinical testing, curation
not providedinheritedyesnot providednot providednot providednot providednot providedclinical testing
not providedunknownunknownnot providednot providednot providednot providednot providedliterature only
Africangermlineyes1not providednot providednot providednot providedclinical testing
African, Latin American, Caribbeangermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazigermlineyes1078not providednot providednot providednot providedclinical testing
Ashkenazinot providedyes6not providednot providednot providednot providedclinical testing
Ashkenazi Jewishgermlineyes9not providednot providednot providednot providedclinical testing
Ashkenazi, Central/Eastern Europeangermlineyes31not providednot providednot providednot providedclinical testing
Ashkenazi, Central/Eastern European, Neagermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazi, Dutch, Italiangermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazi, Englishrainegermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazi, Greekgermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazi, Scandinaviangermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazi, Sephardicgermlineyes2not providednot providednot providednot providedclinical testing
Ashkenazi, Sephardic Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Ashkenazi, Western Europeangermlineyes5not providednot providednot providednot providedclinical testing
Ashkenazi, Western, Central/Eastern Europeangermlineyes1not providednot providednot providednot providedclinical testing
Asiangermlineyes2not providednot providednot providednot providedclinical testing
Asian, Ashkenazi, Western Europeangermlineyes1not providednot providednot providednot providedclinical testing
Asian, Indiangermlineyes2not providednot providednot providednot providedclinical testing
Austrian, Jewish, Polishgermlineyes1not providednot providednot providednot providedclinical testing
Caucasiangermlineyes25not providednot providednot providednot providedclinical testing
Caucasiannot providedyes1not providednot providednot providednot providedclinical testing
Caucasian Non Hispanicgermlineyes7not providednot providednot providednot providedclinical testing
Caucasian, Non Ashkenazigermlineyes1not providednot providednot providednot providedclinical testing
Causasiansgermlineyesnot provided2not providednot providedyesclinical testing
Central/Eastern Europeangermlineyes17not providednot providednot providednot providedclinical testing
Central/Eastern European, Russiangermlineyes1not providednot providednot providednot providedclinical testing
Central/Eastern European, Russian, Polishgermlineyes1not providednot providednot providednot providedclinical testing
Central/Eastern European, Turkish, Greekgermlineyes1not providednot providednot providednot providedclinical testing
Chileangermlineyes1not providednot providednot providednot providedclinical testing
Englishgermlineyes1not providednot providednot providednot providedclinical testing
English, Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Englishraine Germangermlineyes1not providednot providednot providednot providedclinical testing
Gypsygermlineyes2not providednot providednot providednot providedclinical testing
Indiangermlineyes3not providednot providednot providednot providedclinical testing
Irish, German, Scottish, English, Welshgermlineyes1not providednot providednot providednot providedclinical testing
Jewishgermlineyes57not providednot providednot providednot providedclinical testing
Jewish, Mixedgermlineyes1not providednot providednot providednot providedclinical testing
Latin American, Caribbeangermlineyes21not providednot providednot providednot providedclinical testing
Latin American, Caribbean, New Mexicangermlineyes1not providednot providednot providednot providedclinical testing
Latviangermlineyes1not providednot providednot providednot providedclinical testing
Mediterraneangermlineyes1not providednot providednot providednot providedclinical testing
Mid, Near Eastgermlineyes2not providednot providednot providednot providedclinical testing
Native Americangermlineyes6not providednot providednot providednot providedclinical testing
Native American, Western Europeangermlineyes1not providednot providednot providednot providedclinical testing
Near Easterngermlineyes5not providednot providednot providednot providedclinical testing
Near Eastern, Sephardic Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Patient Not Ashkenazi Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Romanian, Ashkenazi Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Romanian, Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Russian Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Russian, Ashkenazi Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Russian, Polishgermlineyes1not providednot providednot providednot providedclinical testing
South Asiangermlineyes1not providednot providednot providednot providedclinical testing
Spanishgermlineyes2not providednot providednot providednot providedclinical testing
Western Europeangermlineyes87not providednot providednot providednot providedclinical testing
Western European, Ashkenazigermlineyes23not providednot providednot providednot providedclinical testing
Western European, Ashkenazi, Central, Easgermlineyes1not providednot providednot providednot providedclinical testing
Western European, Ashkenazi, Central/Eastern European, Polish, Austriangermlineyes1not providednot providednot providednot providedclinical testing
Western European, Ashkenazi, English, Dutchgermlineyes1not providednot providednot providednot providedclinical testing
Western European, Central/Eastern Europeangermlineyes1not providednot providednot providednot providedclinical testing
Western European, Danish, German, Nethgermlineyes1not providednot providednot providednot providedclinical testing
Western European, Frenchgermlineyes1not providednot providednot providednot providedclinical testing
Western European, French Canadiangermlineyes1not providednot providednot providednot providedclinical testing
Western European, French, English, Irishgermlineyes1not providednot providednot providednot providedclinical testing
Western European, French, Italiangermlineyes2not providednot providednot providednot providedclinical testing
Western European, French, Spanishgermlineyes1not providednot providednot providednot providedclinical testing
Western European, Jewishgermlineyes1not providednot providednot providednot providedclinical testing
Western European, Latin American, Caribbegermlineyes2not providednot providednot providednot providedclinical testing
Western European, Native American, Centrgermlineyes1not providednot providednot providednot providedclinical testing
Western European, Native American, Latingermlineyes1not providednot providednot providednot providedclinical testing
Western European, Near Eastern Mid Easterngermlineyes1not providednot providednot providednot providedclinical testing
Western European, Spanish Mexicangermlineyes1not providednot providednot providednot providedclinical testing
Western Europeanan, Central/Eastern Europeangermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Common origins of BRCA1 mutations in Canadian breast and ovarian cancer families.

Simard J, Tonin P, Durocher F, Morgan K, Rommens J, Gingras S, Samson C, Leblanc JF, Bélanger C, Dion F, et al.

Nat Genet. 1994 Dec;8(4):392-8.

PubMed [citation]
PMID:
7894492

Ashkenazi Jewish population frequencies for common mutations in BRCA1 and BRCA2.

Roa BB, Boyd AA, Volcik K, Richards CS.

Nat Genet. 1996 Oct;14(2):185-7.

PubMed [citation]
PMID:
8841191
See all PubMed Citations (25)

Details of each submission

From OMIM, SCV000039518.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (10)

Description

Breast-Ovarian Cancer Susceptibility

Simard et al. (1994) studied 30 Canadian families with breast and/or ovarian cancer (604370) for germline mutations in the coding region of the BRCA1 candidate gene. They identified a 2-bp (AG185) deletion in the normal sequence TTA GAG of codons 22-23 in exon 3. The AGAG presumably predisposed to the deletion. This mutation changes the reading frame of the mRNA and causes a premature termination codon at position 39. This mutation was detected in index cases from 4 families that were not known to be related and originated from different areas in Canada. In these 4 families there were a total of 12 cases of breast cancer and 11 cases of ovarian cancer.

Struewing et al. (1995) pointed out that all 10 published families with the 185delAG mutation (also called 187delAG) were Ashkenazi Jewish (of Eastern European origin). They knew of an eleventh Ashkenazi breast/ovarian cancer family with the 185delAG mutation; furthermore, only 1 Ashkenazi Jewish family was known to have a BRCA1 mutation other than 185delAG. In addition, Ashkenazi families with the 185delAG mutation appeared to share a common haplotype. In a study of 858 Ashkenazim seeking genetic testing for conditions unrelated to cancer, they observed the 185delAG mutation in 0.9% (95% confidence limit, 0.4%-1.8%), and in 815 reference individuals not selected for ethnic origin, none had the mutation.

Roa et al. (1996) found the 185delAG mutation in 1.09% of approximately 3,000 Ashkenazi Jewish individuals and found the 5382insC mutation (113705.0018) in 0.13%. BRCA2 analysis on 3,085 individuals from the same population showed a carrier frequency of 1.52% for the 6174delT mutation (600185.0009). The expanded population-based study confirmed that the BRCA1 185delAG mutation and the BRCA2 6174delT mutation constituted the 2 most frequent mutant alleles predisposing to hereditary breast cancer among Ashkenazim and suggested a relatively lower penetrance for the 6174delT mutation in BRCA2.

Bar-Sade et al. (1997) examined 639 unrelated healthy Jews of Iraqi extraction, a presumed low-risk group for the 185delAG mutation which occurs predominantly in Ashkenazim. Three individuals were identified as 185delAG mutation carriers, and haplotype analysis of the Iraqi mutation carriers showed that 2 of the Iraqis shared a haplotype in common with 6 Ashkenazi mutation carriers, and a third had a haplotype that differed by a single marker. This suggested to Bar-Sade et al. (1997) that the BRCA1 185delAG mutation may have arisen before the dispersion of the Jewish people in the Diaspora, at least at the time of Christ.

Bar-Sade et al. (1998) extended their analyses to other non-Ashkenazi subsets: 354 of Moroccan origin, 200 Yemenites, and 150 Iranian Jews. Four of Moroccan origin (1.1%) and none of the Yemenites or Iranians were carriers of the 185delAG mutation. BRCA1 allelic patterns (haplotypes) were determined for 4 of these individuals and for 12 additional non-Ashkenazi 185delAG mutation carriers who had breast/ovarian cancer. The common 'Ashkenazi haplotype' was shared by 6 non-Ashkenazi individuals; 4 had a closely related pattern, and the rest (n = 6) displayed a distinct BRCA1 allelic pattern. The authors concluded that the 185delAG BRCA1 mutation occurs in some non-Ashkenazi populations at rates comparable with that of Ashkenazim. The majority of Jewish 185delAG mutation carriers have the same haplotype, supporting the founder effect notion, but dating the mutation's origin to an earlier date than previously estimated. The different allelic pattern at the BRCA1 locus in some Jewish mutation carriers might suggest that the mutation arose independently.

Bandera et al. (1998) demonstrated the 185delAG mutation in 2 women with a personal or family history of breast cancer and papillary serous carcinoma of the peritoneum (PSCP). PSCP is histologically indistinguishable from serous epithelial ovarian carcinoma and it may develop years after oophorectomy. Schorge et al. (1998) demonstrated that the tumors were multifocal in these cases, indicating that patients with germline BRCA1 mutations may develop PSCP in addition to breast and ovarian carcinomas.

Ah Mew et al. (2002) reported the 185delAG mutation in a non-Jewish Chilean family with no reported Jewish ancestry. The linked haplotype present in this family was identical to that identified in the Ashkenazi Jewish population.

Buisson et al. (2006) found that BRCA1 transcripts bearing the 185delAG mutation are not degraded by nonsense-mediated mRNA decay. Using Western blot analysis, they examined HeLa cells transfected with minigenes for this transcript and another with a premature termination codon at position 36 and found that translation from these transcripts was reinitiated at codon 128.

Pancreatic Cancer Susceptibility

Al-Sukhni et al. (2008) found loss of heterozygosity at the BRCA1 locus in pancreatic tumor DNA from 5 (71%) of 7 patients with pancreatic cancer (PNCA4; 614320) who carried a heterozygous germline BRCA1 mutation. Three patients carried the 185delAG mutation. In contrast, only 1 (11%) of 9 patients with sporadic pancreatic cancer and no germline BRCA1 mutations showed LOH at the BRCA1 locus. Al-Sukhni et al. (2008) concluded that BRCA1 germline mutations likely predispose to the development of pancreatic cancer, and suggested that individuals with these mutations be considered for pancreatic cancer-screening programs.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

From Sharing Clinical Reports Project (SCRP), SCV000053880.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot provided304not providednot providednot providednot providednot provided See 1

Co-occurrences

#ZygosityAllelesNumber of Observations
1SingleHeterozygoteBRCA2:6010G>A (E1928K)1
1SingleHeterozygoteBRCA2:6174delT2

From Breast Cancer Information Core (BIC) (BRCA1), SCV000144169.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided599not providednot providedclinical testing PubMed (2)
2not provided32not providednot providedclinical testing PubMed (2)
3not provided1not providednot providedclinical testing PubMed (2)
4not provided1not providednot providedclinical testing PubMed (2)
5not provided2not providednot providedclinical testing PubMed (2)
6not provided1not providednot providedclinical testing PubMed (2)
7not provided7not providednot providedclinical testing PubMed (2)
8not provided1not providednot providedclinical testing PubMed (2)
9not provided1not providednot providedclinical testing PubMed (2)
10not provided1not providednot providedclinical testing PubMed (2)
11not provided1not providednot providedclinical testing PubMed (2)
12not provided1not providednot providedclinical testing PubMed (2)
13African1not providednot providedclinical testing PubMed (2)
14African, Latin American, Caribbean1not providednot providedclinical testing PubMed (2)
15Ashkenazi1075not providednot providedclinical testing PubMed (2)
16Ashkenazi3not providednot providedclinical testing PubMed (2)
17Ashkenazi6not providednot providedclinical testing PubMed (2)
18Ashkenazi Jewish6not providednot providedclinical testing PubMed (2)
19Ashkenazi Jewish1not providednot providedclinical testing PubMed (2)
20Ashkenazi Jewish1not providednot providedclinical testing PubMed (2)
21Ashkenazi Jewish1not providednot providedclinical testing PubMed (2)
22Ashkenazi, Central/Eastern European31not providednot providedclinical testing PubMed (2)
23Ashkenazi, Central/Eastern European, Nea1not providednot providedclinical testing PubMed (2)
24Ashkenazi, Dutch, Italian1not providednot providedclinical testing PubMed (2)
25Ashkenazi, Englishraine1not providednot providedclinical testing PubMed (2)
26Ashkenazi, Greek1not providednot providedclinical testing PubMed (2)
27Ashkenazi, Scandinavian1not providednot providedclinical testing PubMed (2)
28Ashkenazi, Sephardic2not providednot providedclinical testing PubMed (2)
29Ashkenazi, Sephardic Jewish1not providednot providedclinical testing PubMed (2)
30Ashkenazi, Western European5not providednot providedclinical testing PubMed (2)
31Ashkenazi, Western, Central/Eastern European1not providednot providedclinical testing PubMed (2)
32Asian2not providednot providedclinical testing PubMed (2)
33Asian, Ashkenazi, Western European1not providednot providedclinical testing PubMed (2)
34Asian, Indian2not providednot providedclinical testing PubMed (2)
35Austrian, Jewish, Polish1not providednot providedclinical testing PubMed (2)
36Caucasian1not providednot providedclinical testing PubMed (2)
37Caucasian6not providednot providedclinical testing PubMed (2)
38Caucasian6not providednot providedclinical testing PubMed (2)
39Caucasian5not providednot providedclinical testing PubMed (2)
40Caucasian1not providednot providedclinical testing PubMed (2)
41Caucasian6not providednot providedclinical testing PubMed (2)
42Caucasian1not providednot providedclinical testing PubMed (2)
43Caucasian Non Hispanic7not providednot providedclinical testing PubMed (2)
44Caucasian, Non Ashkenazi1not providednot providedclinical testing PubMed (2)
45Central/Eastern European17not providednot providedclinical testing PubMed (2)
46Central/Eastern European, Russian1not providednot providedclinical testing PubMed (2)
47Central/Eastern European, Russian, Polish1not providednot providedclinical testing PubMed (2)
48Central/Eastern European, Turkish, Greek1not providednot providedclinical testing PubMed (2)
49Chilean1not providednot providedclinical testing PubMed (2)
50English1not providednot providedclinical testing PubMed (2)
51English, Jewish1not providednot providedclinical testing PubMed (2)
52Englishraine German1not providednot providedclinical testing PubMed (2)
53Gypsy2not providednot providedclinical testing PubMed (2)
54Indian3not providednot providedclinical testing PubMed (2)
55Irish, German, Scottish, English, Welsh1not providednot providedclinical testing PubMed (2)
56Jewish54not providednot providedclinical testing PubMed (2)
57Jewish1not providednot providedclinical testing PubMed (2)
58Jewish1not providednot providedclinical testing PubMed (2)
59Jewish1not providednot providedclinical testing PubMed (2)
60Jewish, Mixed1not providednot providedclinical testing PubMed (2)
61Latin American, Caribbean21not providednot providedclinical testing PubMed (2)
62Latin American, Caribbean, New Mexican1not providednot providedclinical testing PubMed (2)
63Latvian1not providednot providedclinical testing PubMed (2)
64Mediterranean1not providednot providedclinical testing PubMed (2)
65Mid, Near East2not providednot providedclinical testing PubMed (2)
66Native American6not providednot providedclinical testing PubMed (2)
67Native American, Western European1not providednot providedclinical testing PubMed (2)
68Near Eastern5not providednot providedclinical testing PubMed (2)
69Near Eastern, Sephardic Jewish1not providednot providedclinical testing PubMed (2)
70Patient Not Ashkenazi Jewish1not providednot providedclinical testing PubMed (2)
71Romanian, Ashkenazi Jewish1not providednot providedclinical testing PubMed (2)
72Romanian, Jewish1not providednot providedclinical testing PubMed (2)
73Russian Jewish1not providednot providedclinical testing PubMed (2)
74Russian, Ashkenazi Jewish1not providednot providedclinical testing PubMed (2)
75Russian, Polish1not providednot providedclinical testing PubMed (2)
76Spanish2not providednot providedclinical testing PubMed (2)
77Western European87not providednot providedclinical testing PubMed (2)
78Western European, Ashkenazi23not providednot providedclinical testing PubMed (2)
79Western European, Ashkenazi, Central, Eas1not providednot providedclinical testing PubMed (2)
80Western European, Ashkenazi, Central/Eastern European, Polish, Austrian1not providednot providedclinical testing PubMed (2)
81Western European, Ashkenazi, English, Dutch1not providednot providedclinical testing PubMed (2)
82Western European, Central/Eastern European1not providednot providedclinical testing PubMed (2)
83Western European, Danish, German, Neth1not providednot providedclinical testing PubMed (2)
84Western European, French1not providednot providedclinical testing PubMed (2)
85Western European, French Canadian1not providednot providedclinical testing PubMed (2)
86Western European, French, English, Irish1not providednot providedclinical testing PubMed (2)
87Western European, French, Italian2not providednot providedclinical testing PubMed (2)
88Western European, French, Spanish1not providednot providedclinical testing PubMed (2)
89Western European, Jewish1not providednot providedclinical testing PubMed (2)
90Western European, Latin American, Caribbe2not providednot providedclinical testing PubMed (2)
91Western European, Native American, Centr1not providednot providedclinical testing PubMed (2)
92Western European, Native American, Latin1not providednot providedclinical testing PubMed (2)
93Western European, Near Eastern Mid Eastern1not providednot providedclinical testing PubMed (2)
94Western European, Spanish Mexican1not providednot providedclinical testing PubMed (2)
95Western Europeanan, Central/Eastern European1not providednot providedclinical testing PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided599not providednot providednot provided
2germlineyesnot providednot providednot provided32not providednot providednot provided
3germlineyesnot providednot providednot provided1not providednot providednot provided
4germlineyesnot providednot providednot provided1not providednot providednot provided
5germlineyesnot providednot providednot provided2not providednot providednot provided
6germlineyesnot providednot providednot provided1not providednot providednot provided
7germlineyesnot providednot providednot provided7not providednot providednot provided
8germlineyesnot providednot providednot provided1not providednot providednot provided
9germlineyesnot providednot providednot provided1not providednot providednot provided
10germlineyesnot providednot providednot provided1not providednot providednot provided
11germlineyesnot providednot providednot provided1not providednot providednot provided
12germlineyesnot providednot providednot provided1not providednot providednot provided
13germlineyesnot providednot providednot provided1not providednot providednot provided
14germlineyesnot providednot providednot provided1not providednot providednot provided
15germlineyesnot providednot providednot provided1075not providednot providednot provided
16germlineyesnot providednot providednot provided3not providednot providednot provided
17unknownyesnot providednot providednot provided6not providednot providednot provided
18germlineyesnot providednot providednot provided6not providednot providednot provided
19germlineyesnot providednot providednot provided1not providednot providednot provided
20germlineyesnot providednot providednot provided1not providednot providednot provided
21germlineyesnot providednot providednot provided1not providednot providednot provided
22germlineyesnot providednot providednot provided31not providednot providednot provided
23germlineyesnot providednot providednot provided1not providednot providednot provided
24germlineyesnot providednot providednot provided1not providednot providednot provided
25germlineyesnot providednot providednot provided1not providednot providednot provided
26germlineyesnot providednot providednot provided1not providednot providednot provided
27germlineyesnot providednot providednot provided1not providednot providednot provided
28germlineyesnot providednot providednot provided2not providednot providednot provided
29germlineyesnot providednot providednot provided1not providednot providednot provided
30germlineyesnot providednot providednot provided5not providednot providednot provided
31germlineyesnot providednot providednot provided1not providednot providednot provided
32germlineyesnot providednot providednot provided2not providednot providednot provided
33germlineyesnot providednot providednot provided1not providednot providednot provided
34germlineyesnot providednot providednot provided2not providednot providednot provided
35germlineyesnot providednot providednot provided1not providednot providednot provided
36germlineyesnot providednot providednot provided1not providednot providednot provided
37germlineyesnot providednot providednot provided6not providednot providednot provided
38germlineyesnot providednot providednot provided6not providednot providednot provided
39germlineyesnot providednot providednot provided5not providednot providednot provided
40germlineyesnot providednot providednot provided1not providednot providednot provided
41germlineyesnot providednot providednot provided6not providednot providednot provided
42unknownyesnot providednot providednot provided1not providednot providednot provided
43germlineyesnot providednot providednot provided7not providednot providednot provided
44germlineyesnot providednot providednot provided1not providednot providednot provided
45germlineyesnot providednot providednot provided17not providednot providednot provided
46germlineyesnot providednot providednot provided1not providednot providednot provided
47germlineyesnot providednot providednot provided1not providednot providednot provided
48germlineyesnot providednot providednot provided1not providednot providednot provided
49germlineyesnot providednot providednot provided1not providednot providednot provided
50germlineyesnot providednot providednot provided1not providednot providednot provided
51germlineyesnot providednot providednot provided1not providednot providednot provided
52germlineyesnot providednot providednot provided1not providednot providednot provided
53germlineyesnot providednot providednot provided2not providednot providednot provided
54germlineyesnot providednot providednot provided3not providednot providednot provided
55germlineyesnot providednot providednot provided1not providednot providednot provided
56germlineyesnot providednot providednot provided54not providednot providednot provided
57germlineyesnot providednot providednot provided1not providednot providednot provided
58germlineyesnot providednot providednot provided1not providednot providednot provided
59germlineyesnot providednot providednot provided1not providednot providednot provided
60germlineyesnot providednot providednot provided1not providednot providednot provided
61germlineyesnot providednot providednot provided21not providednot providednot provided
62germlineyesnot providednot providednot provided1not providednot providednot provided
63germlineyesnot providednot providednot provided1not providednot providednot provided
64germlineyesnot providednot providednot provided1not providednot providednot provided
65germlineyesnot providednot providednot provided2not providednot providednot provided
66germlineyesnot providednot providednot provided6not providednot providednot provided
67germlineyesnot providednot providednot provided1not providednot providednot provided
68germlineyesnot providednot providednot provided5not providednot providednot provided
69germlineyesnot providednot providednot provided1not providednot providednot provided
70germlineyesnot providednot providednot provided1not providednot providednot provided
71germlineyesnot providednot providednot provided1not providednot providednot provided
72germlineyesnot providednot providednot provided1not providednot providednot provided
73germlineyesnot providednot providednot provided1not providednot providednot provided
74germlineyesnot providednot providednot provided1not providednot providednot provided
75germlineyesnot providednot providednot provided1not providednot providednot provided
76germlineyesnot providednot providednot provided2not providednot providednot provided
77germlineyesnot providednot providednot provided87not providednot providednot provided
78germlineyesnot providednot providednot provided23not providednot providednot provided
79germlineyesnot providednot providednot provided1not providednot providednot provided
80germlineyesnot providednot providednot provided1not providednot providednot provided
81germlineyesnot providednot providednot provided1not providednot providednot provided
82germlineyesnot providednot providednot provided1not providednot providednot provided
83germlineyesnot providednot providednot provided1not providednot providednot provided
84germlineyesnot providednot providednot provided1not providednot providednot provided
85germlineyesnot providednot providednot provided1not providednot providednot provided
86germlineyesnot providednot providednot provided1not providednot providednot provided
87germlineyesnot providednot providednot provided2not providednot providednot provided
88germlineyesnot providednot providednot provided1not providednot providednot provided
89germlineyesnot providednot providednot provided1not providednot providednot provided
90germlineyesnot providednot providednot provided2not providednot providednot provided
91germlineyesnot providednot providednot provided1not providednot providednot provided
92germlineyesnot providednot providednot provided1not providednot providednot provided
93germlineyesnot providednot providednot provided1not providednot providednot provided
94germlineyesnot providednot providednot provided1not providednot providednot provided
95germlineyesnot providednot providednot provided1not providednot providednot provided

From Pathway Genomics, SCV000189887.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (6)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

From Michigan Medical Genetics Laboratories,University of Michigan, SCV000195875.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providedBloodnot providednot providednot providednot providednot provided

From Counsyl, SCV000220360.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (5)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

From University of Washington Department of Laboratory Medicine,University of Washington, SCV000266036.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
2not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided
2germlineno1not providednot provided1not providednot providednot provided

From Evidence-based Network for the Interpretation of Germline Mutant Alleles (ENIGMA), SCV000282348.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcurationnot provided

Description

Variant allele predicted to encode a truncated non-functional protein.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

From Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA), c/o University of Cambridge, SCV000326390.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot provided2127not provided

From Department of Medical Genetics,Oslo University Hospital, SCV000564332.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided13not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided13not providednot providednot provided

From Genologica Medica, SCV000577914.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1Causasiansnot providednot providedyesclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providedBloodnot providednot providednot provided2not provided

From Bioinformatics dept.,Datar Cancer Genetics Limited, India, SCV000583605.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1South Asian1not providednot providedclinical testing PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

From Genetic Services Laboratory, University of Chicago, SCV000593688.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Diagnostic Laboratory, Department of Genetics,University Medical Center Groningen - VKGL Data-share Consensus, SCV000733684.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From Genomic Research Center,Shahid Beheshti University of Medical Sciences, SCV000746289.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

From Human Genome Sequencing Center Clinical Lab,Baylor College of Medicine, SCV000839891.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)

Description

The c.68_69del (p.Glu23Valfs*17) variant in the BRCA1 gene has been detected multiple patients with breast cancer and/or ovarian cancer [PMID 14576434, 26718727, 21503673, 22430266, 23633455, 22752604, referred as c.185delAG in some publications]. This variant is a founder mutation in Ashkenazi Jews with a frequency of about 1% [PMID 14576434]. The variant has also been detected in patients with prostate [PMID 22516946] and pancreatic cancer [PMID 20711688, 24737347, 23658460, 26440929]. This one bp deletion in exon 2 results in a frameshift and the creation of a premature stop codon. Functional in vitro assays showed that this variant was deleterious [PMID 23867111]. This variant has been reported in 31 individuals from the ExAC database (http://exac.broadinstitute.org/variant/22-29091226-TA-T). This variant is thus classified as pathogenic

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 23, 2019