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NM_000402.4(G6PD):c.577G>A (p.Gly193Ser) AND G6PD MAHIDOL

Germline classification:
other (1 submission)
Last evaluated:
May 24, 2017
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000011085.4

Allele description [Variation Report for NM_000402.4(G6PD):c.577G>A (p.Gly193Ser)]

NM_000402.4(G6PD):c.577G>A (p.Gly193Ser)

Gene:
G6PD:glucose-6-phosphate dehydrogenase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xq28
Genomic location:
Preferred name:
NM_000402.4(G6PD):c.577G>A (p.Gly193Ser)
Other names:
G6PD, GLY163SER; G6PD Mahidol
HGVS:
  • NC_000023.11:g.154534495C>T
  • NG_009015.2:g.18078G>A
  • NM_000402.4:c.577G>A
  • NM_001042351.3:c.487G>A
  • NM_001360016.2:c.487G>AMANE SELECT
  • NP_000393.4:p.Gly193Ser
  • NP_001035810.1:p.Gly163Ser
  • NP_001346945.1:p.Gly163Ser
  • NC_000023.10:g.153762710C>T
  • NM_000402.3:c.577G>A
  • NM_001042351.1:c.487G>A
  • NM_001042351.2:c.487G>A
  • NM_001042351.3:c.487G>A
Protein change:
G163S; GLY163SER
Links:
OMIM: 305900.0005; dbSNP: rs137852314
NCBI 1000 Genomes Browser:
rs137852314
Molecular consequence:
  • NM_000402.4:c.577G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001042351.3:c.487G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001360016.2:c.487G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
G6PD MAHIDOL
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000031312OMIM
no assertion criteria provided
other
(May 24, 2017)
germlineliterature only

PubMed (7)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

G-6-PD variants in Laotians.

Panich V.

Hum Hered. 1974;24(3):285-90. No abstract available.

PubMed [citation]
PMID:
4435794

Polymorphic sites in the African population detected by sequence analysis of the glucose-6-phosphate dehydrogenase gene outline the evolution of the variants A and A-.

Vulliamy TJ, Othman A, Town M, Nathwani A, Falusi AG, Mason PJ, Luzzatto L.

Proc Natl Acad Sci U S A. 1991 Oct 1;88(19):8568-71.

PubMed [citation]
PMID:
1924316
PMCID:
PMC52550
See all PubMed Citations (7)

Details of each submission

From OMIM, SCV000031312.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (7)

Description

See Panich et al. (1972). A G-to-A change at base 487 (exon 6) leads to substitution of serine for glycine at amino acid 163 (Vulliamy, 1989). This mutation is polymorphic in Southeast Asia, causes class 2 enzyme derangement, and is associated with a new AluI site (Vulliamy et al., 1989). The same mutation was identified by Tang et al. (1992) in a Taiwanese in Taiwan.

Matsuoka et al. (2004) found that 11% of blood samples from persons in remote areas of Myanmar (former Burma) indicated G6PD deficiency. Taken together with data from a previous report (Iwai et al., 2001), these findings indicated that 91.3% of G6PD variants were G6PD Mahidol. The findings suggested that the Myanmar population is derived from homogeneous ancestries different from those of Thai, Malaysian, and Indonesian populations.

Louicharoen et al. (2009) investigated the effect of the G6PD-Mahidol 487A variant on human survival related to P. vivax and P. falciparum malaria in Southeast Asia. They showed that strong and recent positive selection has targeted the Mahidol variant over the past 1,500 years. The authors found that the G6PD-Mahidol variant reduces vivax, but not falciparum, parasite density in humans, which indicates that P. vivax has been a driving force behind the strong selective advantage conferred by this mutation.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 20, 2024