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NM_000330.4(RS1):c.221G>T (p.Gly74Val) AND Juvenile retinoschisis

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 1, 1999
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000010568.11

Allele description [Variation Report for NM_000330.4(RS1):c.221G>T (p.Gly74Val)]

NM_000330.4(RS1):c.221G>T (p.Gly74Val)

Genes:
CDKL5:cyclin dependent kinase like 5 [Gene - OMIM - HGNC]
RS1:retinoschisin 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp22.13
Genomic location:
Preferred name:
NM_000330.4(RS1):c.221G>T (p.Gly74Val)
HGVS:
  • NC_000023.11:g.18647296C>A
  • NG_008475.1:g.226692C>A
  • NG_008659.3:g.35153G>T
  • NM_000330.4:c.221G>TMANE SELECT
  • NM_001037343.2:c.2797+1206C>A
  • NM_003159.3:c.2797+1206C>A
  • NP_000321.1:p.Gly74Val
  • NP_000321.1:p.Gly74Val
  • LRG_702t1:c.221G>T
  • LRG_702:g.35153G>T
  • LRG_702p1:p.Gly74Val
  • NC_000023.10:g.18665416C>A
  • NM_000330.3:c.221G>T
  • O15537:p.Gly74Val
Protein change:
G74V; GLY74VAL
Links:
UniProtKB: O15537#VAR_008182; OMIM: 300839.0005; dbSNP: rs104894933
NCBI 1000 Genomes Browser:
rs104894933
Molecular consequence:
  • NM_001037343.2:c.2797+1206C>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_003159.3:c.2797+1206C>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000330.4:c.221G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Juvenile retinoschisis (RS1)
Synonyms:
XJR; X-linked retinoschisis; Retinoschisis juvenile X chromosome-linked; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010725; MedGen: C3714753; Orphanet: 792; OMIM: 312700

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000030794OMIM
no assertion criteria provided
Pathogenic
(Apr 1, 1999)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Three widespread founder mutations contribute to high incidence of X-linked juvenile retinoschisis in Finland.

Huopaniemi L, Rantala A, Forsius H, Somer M, de la Chapelle A, Alitalo T.

Eur J Hum Genet. 1999 Apr;7(3):368-76.

PubMed [citation]
PMID:
10234514

Details of each submission

From OMIM, SCV000030794.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

Huopaniemi et al. (1999) found that the founder mutations glu72 to lys (E72K; 300839.0003) and gly74 to val (G74V) in the XLRS1 gene account for RS (RS1; 312700) in western Finland.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 16, 2024