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NM_000435.3(NOTCH3):c.544C>T (p.Arg182Cys) AND Cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1

Germline classification:
Pathogenic (5 submissions)
Last evaluated:
Nov 4, 2022
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000009801.11

Allele description [Variation Report for NM_000435.3(NOTCH3):c.544C>T (p.Arg182Cys)]

NM_000435.3(NOTCH3):c.544C>T (p.Arg182Cys)

Gene:
NOTCH3:notch receptor 3 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.12
Genomic location:
Preferred name:
NM_000435.3(NOTCH3):c.544C>T (p.Arg182Cys)
HGVS:
  • NC_000019.10:g.15192095G>A
  • NG_009819.1:g.13887C>T
  • NM_000435.3:c.544C>TMANE SELECT
  • NP_000426.2:p.Arg182Cys
  • NC_000019.9:g.15302906G>A
  • NM_000435.2:c.544C>T
  • Q9UM47:p.Arg182Cys
Protein change:
R182C; ARG182CYS
Links:
UniProtKB: Q9UM47#VAR_012883; OMIM: 600276.0003; dbSNP: rs28933697
NCBI 1000 Genomes Browser:
rs28933697
Molecular consequence:
  • NM_000435.3:c.544C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
5

Condition(s)

Name:
Cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1
Synonyms:
Dementia, hereditary multi-infarct type; Cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 1
Identifiers:
MONDO: MONDO:0000914; MedGen: C4551768; Orphanet: 136; OMIM: 125310

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000030022OMIM
no assertion criteria provided
Pathogenic
(Mar 1, 2000)
germlineliterature only

PubMed (3)
[See all records that cite these PMIDs]

SCV001156358GenomeConnect - CureCADASIL
no classification provided
not providedunknownphenotyping only

SCV001950078Institute of Human Genetics, University of Leipzig Medical Center
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Aug 11, 2021)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV002581807MGZ Medical Genetics Center
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Aug 12, 2022)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

SCV004175686Genetics and Molecular Pathology, SA Pathology

See additional submitters

criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Nov 4, 2022)
germlineclinical testing

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only
not providedgermlineyes5not providednot providednot providednot providedclinical testing
not providedunknownyes1not providednot provided1not providedphenotyping only
not providedunknownunknown1not providednot provided1not providedphenotyping only

Citations

PubMed

Notch3 mutations in CADASIL, a hereditary adult-onset condition causing stroke and dementia.

Joutel A, Corpechot C, Ducros A, Vahedi K, Chabriat H, Mouton P, Alamowitch S, Domenga V, Cécillion M, Marechal E, Maciazek J, Vayssiere C, Cruaud C, Cabanis EA, Ruchoux MM, Weissenbach J, Bach JF, Bousser MG, Tournier-Lasserve E.

Nature. 1996 Oct 24;383(6602):707-10.

PubMed [citation]
PMID:
8878478

Strong clustering and stereotyped nature of Notch3 mutations in CADASIL patients.

Joutel A, Vahedi K, Corpechot C, Troesch A, Chabriat H, Vayssière C, Cruaud C, Maciazek J, Weissenbach J, Bousser MG, Bach JF, Tournier-Lasserve E.

Lancet. 1997 Nov 22;350(9090):1511-5.

PubMed [citation]
PMID:
9388399
See all PubMed Citations (5)

Details of each submission

From OMIM, SCV000030022.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (3)

Description

In 2 unrelated CADASIL1 (125310) patients, Joutel et al. (1996, 1997) observed a CGC-to-TGC transition in a different codon in exon N3 of the NOTCH3 gene that resulted in substitution of cys for arg (R182C) in the same EGF-like domain.

Joutel et al. (2000) reported a patient who was thought to have CADASIL, although no first-degree relative was affected. The patient was found to carry a heterozygous arg182-to-cys mutation in the NOTCH3 gene; the mutation was absent in his parents, indicating a de novo mutation. They suggested that because of the occurrence of such cases, CADASIL may be more frequent than recognized. The frequency of the condition as a familial disorder is reflected in the fact that Joutel et al. (2000) found that more than 400 families had been identified since 1993. The patient with the arg182-to-cys mutation was a 55-year-old businessman who had experienced recurrent transient focal neurologic episodes, some suggestive of transient ischemic attacks and others of migrainous auras, dating back to the age of 32 years. At 48 years of age, he had a minor ischemic stroke with left facial asymmetry and weakness. Brain MRI showed extensive white matter abnormalities. Multiple sclerosis was suspected. At 53 years, he experienced a pure motor right-sided hemiplegia, which progressed over 5 days. Recovery was only partial, and the patient remained disabled with difficulties in walking and in moving his right hand.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

From GenomeConnect - CureCADASIL, SCV001156358.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedphenotyping onlynot provided
2not provided1not providednot providedphenotyping onlynot provided

Description

Variant interpreted as Pathogenic and reported, most recently, on 05-09-2018 by lab or GTR ID Athena Diagnostics. GenomeConnect - CureCADASIL assertions are reported exactly as they appear on the patient-provided report from the testing laboratory. Registry team members make no attempt to reinterpret the clinical significance of the variant. Phenotypic details are available under supporting information.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyes1not providednot provided1not providednot providednot provided
2unknownunknown1not providednot provided1not providednot providednot provided

From Institute of Human Genetics, University of Leipzig Medical Center, SCV001950078.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

From MGZ Medical Genetics Center, SCV002581807.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided5not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided5not providednot providednot provided

From Genetics and Molecular Pathology, SA Pathology, SCV004175686.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (4)

Description

The NOTCH3 c.544C>T variant is classified as PATHOGENIC (PS4, PM2_Supporting, PS2_supporting, PM1_Strong, PP3_moderate) The NOTCH3 c.544C>T variant is a single nucleotide change in exon 4/33 of the NOTCH3 gene, which is predicted to change the amino acid arginine at position 182 in the protein to cysteine. The variant has been reported in multiple individuals with a clinical presentation of CADASIL (PMID: 9388399, 15364702) (PS4) and is rare in population databases (PM2-supp). This variant has been reported in one affected patient with no family history of this condition (PMID:10716263) (PS2_supporting). This variant is located in the EGF-like 4 domain and results in a gain of a cysteine residue (PM1-strong). Computational predictions moderately support a deleterious effect on the gene or gene product (PP3_moderate). This variant is in dbSNP (rs28933697), has been reported as Pathogenic by other diagnostic laboratories (ClinVar Variation ID:9220) and has been reported as disease-causing in HGMD (CM961044). This variant has been listed 8 times on the NOTCH3 LOVD

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 20, 2024