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GYG1, 1-BP DEL, 487G AND Glycogen storage disease XV

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 1, 2010
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000006317.3

Allele description

GYG1, 1-BP DEL, 487G

Gene:
GYG1:glycogenin 1 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
3q24-q25.1
Preferred name:
GYG1, 1-BP DEL, 487G
HGVS:
    Nucleotide change:
    1-BP DEL, 487G
    Links:
    OMIM: 603942.0001

    Condition(s)

    Name:
    Glycogen storage disease XV (GSD15)
    Synonyms:
    GLYCOGENIN DEFICIENCY; GSD XV; GYG1 DEFICIENCY
    Identifiers:
    MONDO: MONDO:0013291; MedGen: C3150754; Orphanet: 263297; OMIM: 613507

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    Assertion and evidence details

    Submission AccessionSubmitterReview Status
    (Assertion method)
    Clinical Significance
    (Last evaluated)
    OriginMethodCitations
    SCV000026499OMIM
    no assertion criteria provided
    Pathogenic
    (Apr 1, 2010)
    germlineliterature only

    PubMed (1)
    [See all records that cite this PMID]

    Summary from all submissions

    EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
    not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

    Citations

    PubMed

    Glycogenin-1 deficiency and inactivated priming of glycogen synthesis.

    Moslemi AR, Lindberg C, Nilsson J, Tajsharghi H, Andersson B, Oldfors A.

    N Engl J Med. 2010 Apr 1;362(13):1203-10. doi: 10.1056/NEJMoa0900661.

    PubMed [citation]
    PMID:
    20357282

    Details of each submission

    From OMIM, SCV000026499.2

    #EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
    1not providednot providednot providednot providedliterature only PubMed (1)

    Description

    In a 27-year-old man with muscle weakness and cardiac arrhythmias associated with glycogen depletion (GSD15; 613507), Moslemi et al. (2010) identified compound heterozygosity for a 1-bp deletion (487delG) in exon 5 of the GYG1 gene, resulting in a frameshift and premature termination sequence at codon 167, and a 248C-T transition in exon 3 of the GYG1 gene, resulting in a thr83-to-met (T83M; 603942.0002) substitution at a highly conserved residue. The patient's unaffected mother was heterozygous for the deletion, and his unaffected father and 2 brothers were heterozygous for the missense mutation. Neither mutation was found in 200 control chromosomes of similar ancestry. Functional studies in Chinese hamster ovary (CHO) cells showed that recombinant wildtype glycogenin-1 was autoglucosylated, whereas recombinant T83M-mutant glycogenin-1 was not. RFLP analysis and sequencing demonstrated that the allele carrying the 487delG mutation was not expressed at the transcript level.

    #SampleMethodObservation
    OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
    1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

    Last Updated: Apr 23, 2022