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NM_014053.4(FLVCR1):c.361A>G (p.Asn121Asp) AND Posterior column ataxia-retinitis pigmentosa syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 1, 2012
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000001933.5

Allele description [Variation Report for NM_014053.4(FLVCR1):c.361A>G (p.Asn121Asp)]

NM_014053.4(FLVCR1):c.361A>G (p.Asn121Asp)

Gene:
FLVCR1:FLVCR choline and heme transporter 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q32.3
Genomic location:
Preferred name:
NM_014053.4(FLVCR1):c.361A>G (p.Asn121Asp)
HGVS:
  • NC_000001.11:g.212858813A>G
  • NG_028131.1:g.5559A>G
  • NM_014053.4:c.361A>GMANE SELECT
  • NP_054772.1:p.Asn121Asp
  • NC_000001.10:g.213032155A>G
  • NM_014053.3:c.361A>G
  • Q9Y5Y0:p.Asn121Asp
Protein change:
N121D; ASN121ASP
Links:
UniProtKB: Q9Y5Y0#VAR_065158; OMIM: 609144.0001; dbSNP: rs267606820
NCBI 1000 Genomes Browser:
rs267606820
Molecular consequence:
  • NM_014053.4:c.361A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Posterior column ataxia-retinitis pigmentosa syndrome (AXPC1)
Synonyms:
Posterior column ataxia with retinitis pigmentosa
Identifiers:
MONDO: MONDO:0012177; MedGen: C1836916; Orphanet: 88628; OMIM: 609033

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000022091OMIM
no assertion criteria provided
Pathogenic
(Jan 1, 2012)
germlineliterature only

PubMed (3)
[See all records that cite these PMIDs]

Puffenberger, E. G. Personal Communication. 2012. Strasburg, Pa.

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

An autosomal recessive disorder with posterior column ataxia and retinitis pigmentosa.

Higgins JJ, Morton DH, Patronas N, Nee LE.

Neurology. 1997 Dec;49(6):1717-20.

PubMed [citation]
PMID:
9409377

Mutations in FLVCR1 cause posterior column ataxia and retinitis pigmentosa.

Rajadhyaksha AM, Elemento O, Puffenberger EG, Schierberl KC, Xiang JZ, Putorti ML, Berciano J, Poulin C, Brais B, Michaelides M, Weleber RG, Higgins JJ.

Am J Hum Genet. 2010 Nov 12;87(5):643-54. doi: 10.1016/j.ajhg.2010.10.013.

PubMed [citation]
PMID:
21070897
PMCID:
PMC2978959
See all PubMed Citations (3)

Details of each submission

From OMIM, SCV000022091.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (3)

Description

In affected members of a large American family of Swiss-German descent with autosomal recessive posterior column ataxia with retinitis pigmentosa (609033) reported by Higgins et al. (1997), Rajadhyaksha et al. (2010) identified a homozygous 361A-G transition in the FLVCR1 gene, resulting in an asn121-to-asp (N121D) substitution at a highly conserved residue in a transmembrane-spanning segment. The family had previously been reported by Higgins et al. (1997). The disorder was characterized by childhood onset of retinitis pigmentosa and proprioceptive loss. The disorder was progressive, with affected individuals becoming blind by the third decade and having severe sensory ataxia and muscle weakness and atrophy.

In a Pennsylvania Mennonite patient with posterior column ataxia and retinitis pigmentosa, Puffenberger et al. (2012) identified homozygosity for the N121D mutation in the FLVCR1 gene. The variant was detected in heterozygosity in 5 of 406 Mennonite control chromosomes, for a population-specific allele frequency of 1.23%. (Puffenberger (2012) stated that the correct population-specific allele frequency data appear in Table 4; corresponding data in the text are incorrect.)

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Feb 14, 2024