LCN2[gene] - ClinVar

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Items: 53

	Variation	Gene (Protein Change)	Type (Consequence)	Condition	Classification, Review status
Select item 160862	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3	LOC126860768, LOC126860769 +3785 more	Copy number gain	See cases	GPathogenic
Select item 150340	GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3	LOC124310660, LOC124310661 +3784 more	Copy number gain	See cases	GPathogenic
Select item 150050	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3	LOC111413024, LOC111413033 +3785 more	Copy number gain	See cases	GPathogenic
Select item 149828	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3	ABCA1, ABCA2 +3785 more	Copy number gain	See cases	GPathogenic
Select item 59875	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3	ABCA1, ABCA2 +3785 more	Copy number gain	See cases	GPathogenic
Select item 33205	GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3	LOC116216098, LOC116216099 +3785 more	Copy number gain	See cases	GPathogenic
Select item 153518	GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3	ABCA1, ABCA2 +3785 more	Copy number gain	See cases	GPathogenic
Select item 155409	GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3	LCN15, LCN2 +3785 more	Copy number gain	See cases	GPathogenic
Select item 144309	GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445)	LOC126860765, LOC126860766 +3785 more	Copy number gain	See cases	GPathogenic
Select item 145579	GRCh38/hg38 9q33.2-34.3(chr9:121073102-138179445)x3	ABCA2, ABL1 +1272 more	Copy number gain	See cases	GPathogenic
Select item 57324	GRCh38/hg38 9q33.2-34.3(chr9:121112395-138075224)x3	LOC130003073, LOC130003074 +1268 more	Copy number gain	See cases	GPathogenic
Select item 57353	GRCh38/hg38 9q33.2-34.3(chr9:122792658-138124532)x3	LOC130002603, LOC130002604 +1210 more	Copy number gain	See cases	GPathogenic
Select item 148721	GRCh38/hg38 9q33.3-34.11(chr9:125055865-128637946)x1	AK1, ANGPTL2 +250 more	Copy number loss	See cases	GPathogenic
Select item 59125	GRCh38/hg38 9q33.3-34.11(chr9:125993583-129682375)x1	AK1, ANGPTL2 +309 more	Copy number loss	See cases	GPathogenic
Select item 663424	NC_000009.11:g.(?_130216797)_(130953151_?)dup	LOC130002656, LOC130002657 +93 more	Duplication	Congenital muscular dystrophy with intellectual disability and severe epilepsy	GUncertain significance
Select item 662282	NC_000009.12:g.(?_127612384)_(128566997_?)del	LOC130002653, LOC130002654 +130 more	Deletion	Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndrome +1 more	GPathogenic
Select item 59134	GRCh38/hg38 9q34.11(chr9:127874581-130421811)x1	AK1, ASB6 +264 more	Copy number loss	See cases	GPathogenic
Select item 59906	GRCh38/hg38 9q34.11(chr9:127919476-130079974)x3	ASB6, BBLN +239 more	Copy number gain	See cases	GPathogenic
Select item 2456995	NM_005564.5(LCN2):c.11G>A (p.Gly4Asp)	LCN2 (G4D)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 2329267	NM_005564.5(LCN2):c.19T>C (p.Trp7Arg)	LCN2 (W7R)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 780048	NM_005564.5(LCN2):c.26G>T (p.Gly9Val)	LCN2 (G9V)	Single nucleotide variant (missense variant)	not provided	GLikely benign
Select item 2469138	NM_005564.5(LCN2):c.44C>A (p.Ala15Asp)	LCN2 (A15D)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 2551675	NM_005564.5(LCN2):c.73T>A (p.Ser25Thr)	LCN2 (S25T)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 753120	NM_005564.5(LCN2):c.93A>G (p.Pro31=)	LCN2	Single nucleotide variant (synonymous variant)	not provided	GLikely benign
Select item 2239112	NM_005564.5(LCN2):c.130G>A (p.Asp44Asn)	LCN2 (D44N)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 707849	NM_005564.5(LCN2):c.139-9C>A	LCN2	Single nucleotide variant (intron variant)	not provided	GLikely benign
Select item 2307141	NM_005564.5(LCN2):c.201C>A (p.Asp67Glu)	LCN2 (D67E)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 2387042	NM_005564.5(LCN2):c.328G>A (p.Gly110Ser)	LCN2 (G110S)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 731724	NM_005564.5(LCN2):c.355+8T>C	LCN2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 403029	NM_005564.5(LCN2):c.356-15C>G	LCN2	Single nucleotide variant (intron variant)	not specified	GBenign
Select item 731725	NM_005564.5(LCN2):c.356-3C>A	LCN2	Single nucleotide variant (intron variant)	not provided	GBenign
Select item 731726	NM_005564.5(LCN2):c.371C>T (p.Thr124Met)	LCN2 (T124M)	Single nucleotide variant (missense variant)	not provided	GBenign
Select item 2535343	NM_005564.5(LCN2):c.526T>C (p.Ser176Pro)	LCN2 (S176P)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 2219462	NM_005564.5(LCN2):c.569T>A (p.Val190Asp)	LCN2 (V190D)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 2210643	NM_005564.5(LCN2):c.589G>A (p.Asp197Asn)	LCN2 (D197N)	Single nucleotide variant (missense variant)	Inborn genetic diseases	GUncertain significance
Select item 3063071	GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3	ABCA1, ABCA2 +769 more	Copy number gain	not specified	GPathogenic
Select item 1711101	GRCh37/hg19 9p24.3-q34.11(chr9:203861-131603223)x3	ANKS6, ANP32B +596 more	Copy number gain	See cases	GPathogenic
Select item 1527562	GRCh37/hg19 9q34.11(chr9:130390139-132760275)	AK1, ASB6 +62 more	Copy number loss	not specified	GPathogenic
Select item 1527545	GRCh37/hg19 9q32-34.11(chr9:116422275-131713233)	ADGRD2, AK1 +141 more	Copy number gain	not specified	GPathogenic
Select item 1527491	GRCh37/hg19 9p24.3-q34.3(chr9:353349-141020389)	OR1L4, PTRH1 +768 more	Copy number gain	not specified	GPathogenic
Select item 1457478	NC_000009.11:g.(?_130216807)_(130953136_?)del	AK1, BBLN +22 more	Deletion	Congenital muscular dystrophy with intellectual disability and severe epilepsy	GPathogenic
Select item 1340206	GRCh37/hg19 9q33.3-34.11(chr9:128523763-132604808)x3	AK1, ANGPTL2 +75 more	Copy number gain	not provided	GPathogenic
Select item 1056169	NC_000009.11:g.(?_129376729)_(131016993_?)del	AK1, EEIG1 +33 more	Deletion	Early infantile epileptic encephalopathy with suppression bursts	GPathogenic
Select item 984763	GRCh37/hg19 9q34.11(chr9:130412438-131423964)x1	COQ4, DNM1 +33 more	Copy number loss	Infantile epilepsy syndrome	GPathogenic
Select item 831938	NC_000009.12:g.(?_127815672)_(128541180_?)del	AK1, BBLN +22 more	Deletion	not provided	GPathogenic
Select item 687100	GRCh37/hg19 9q21.11-34.3(chr9:71416475-141020389)x3	ABCA1, ABCA2 +552 more	Copy number gain	not provided	GPathogenic
Select item 685192	GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3	ABCA1, ABCA2 +769 more	Copy number gain	not provided	GPathogenic
Select item 523294	GRCh37/hg19 9q21.11-34.3(chr9:71069743-140999928)	SEC16A, SEC61B +553 more	Copy number gain	Hypotonia +2 more	GLikely pathogenic
Select item 443986	GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389)	SUSD3, SVEP1 +769 more	Copy number gain	See cases	GPathogenic
Select item 395707	GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407)	PPP1R26, PPP3R2 +771 more	Copy number gain	See cases	GPathogenic
Select item 395356	GRCh37/hg19 9q33.3-34.3(chr9:128652785-141044751)x3	ABCA2, ABL1 +228 more	Copy number gain	See cases	GPathogenic
Select item 394948	GRCh37/hg19 9q33.2-34.3(chr9:124642754-141146461)x3	ABCA2, ABL1 +279 more	Copy number gain	See cases	GPathogenic
Select item 253402	GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3	ANGPTL2, ANKRD18A +771 more	Copy number gain	See cases	GPathogenic

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Items: 53