Conserved Protein Domain Family
ATM1

?
COG5265: ATM1 (this model, PSSM-Id:227590 is obsolete and has been replaced by 444078)
ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Statistics
?
PSSM-Id: 227590
Aligned: 16 rows
Threshold Bit Score: 509.206
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1352002  174 LRNAVFAKVAQNAIRTVSLQTFQHLMKLDLGWHLSRQTGGLTRAMDRGTKGISQVLTAMVFHIIPISFEISVVCGILTYQ 253 baker's yeast
17987775 102 LRDALFASVGQYAVRQLAYKTFVHMHELSLRFHLERRTGGLSRVIERGTKGIETIVRFTILNTLPTILEFALTAVIFAFA 181 Brucella melitensis
16125563 136 ARDTIFTPVAQAAQTRAAVETFAHALSLSIDFHQSKRTGSLSRVIDRGARSMDFLLRGLVFNLAPTGIELILAAVVLAKA 215 Caulobacter crescen...
15892191     --------------------------------------------------------------------------------     Rickettsia conorii
15892193     --------------------------------------------------------------------------------     Rickettsia conorii
15892194     --------------------------------------------------------------------------------     Rickettsia conorii
17545197  84 LREILFSKVTESSVRTLALQVFRHLHALSLRFHLERQTGGMSRDIERGTRGIQSLISYSLYSILPTLVEVGLVITYFFVK 163 Ralstonia solanacearum
19115200 182 LRNSVFAIVSQSAIRSVSSNVYQHLLNLDMNFHLSKQTGSITRAMDRGTKGISFILSSMVLHIIPITLEIAMVSGILTYK 261 fission yeast
19075871   1 --SFLWVPVSQYAYRAISTKALRHVLNLSYDFHLNKRAGEVLTALTKGS-SLNTFAEQVVFQIGPVLLDLGVAMVYFFIK 77  fission yeast
16122801 120 LRNVMFVHVSQNATRLLGLRVFRQLHALSLRFHLERQTGGLSLSIERGTQAVSTVLSRLLFSILPILFEITLVSVIMWRL 199 Yersinia pestis
1352002  254 FGASFAAITFSTMLLYSIFTIKTTAWRTHFRRDANKADNKAASVALDSLINFEAVKYFNNEKYLADKYNGSLMNYRDSQI 333 baker's yeast
17987775 182 YGLSYLVVVAATVWLYTWFTIRASDWRINIRREMNDSDTDANTKAIDSLLNFETVKYFGNEAMEAKRFDGAMARYEKAAT 261 Brucella melitensis
16125563 216 YDWRFAAVALVTVAIYGYVTFAISDWRIGHRRALNEADAEAAGRAVDALLNYETVKSFGGEARAVASYERALDTYGRANI 295 Caulobacter crescen...
15892191     --------------------------------------------------------------------------------     Rickettsia conorii
15892193     --------------------------------------------------------------------------------     Rickettsia conorii
15892194     --------------------------------------------------------------------------------     Rickettsia conorii
17545197 164 YDAWFALITFCALVSYIVFTVTVTNWRTHFRRRMNELDSRANQKAIDSLLNFETVKYFGNEEYETRRYDENLRKYRAAAI 243 Ralstonia solanacearum
19115200 262 YGPSFSAIAATTVALYALFTVRTTSWRTVFRRQANAADSKASAAAIESLINYEAVKTFNNESYEMSRYEKHLSAYEKANV 341 fission yeast
19075871  78 FDIYFTLIVLIMTLCYCYVTVKITSWRTEARRKMVNSWRESYAVQNDAIMNFETVKNFDADDFENERYGHAVDIYLKQER 157 fission yeast
16122801 200 LSGWFALAILVTVSCYILFTVMAVGWRTRFRRELNKANADANTKSIDSLLNYETVKYFGNEDFEAERFNLSRQLYEYAAI 279 Yersinia pestis
1352002  334 KVSQSLAFLNSGQNLIFTTALTAMMYMGCTGVIGGNLTVGDLVLINQLVFQLSVPLNFLGSVYRDLKQSLIDMETLFKLR 413 baker's yeast
17987775 262 QTWTSLGWLNFGQAVIFGAGMAIVMVMSAMEVQKGTQSLGDFVFINALLMQLSIPLNFIGFIYREIRQGLTDIEQMFDLL 341 Brucella melitensis
16125563 296 KATQSLNLLNLVQSGVMSVGLGVMAVLAGSEAAHGRMGPGDVTAAVLILINLYAPLNILGFAYREIRQSLIDMEAMLDLR 375 Caulobacter crescen...
15892191   1 -----------------------------MLLFDEIVTLPTVARNDDLVSTRAMPACNGAENYQKMFKNKTRKNSFSLLL 51  Rickettsia conorii
15892193   1 ------------------------MILSANAINQNKMTVGDLIMVNTYLFQLSILLSILGFAYREIKNALVSMEDMFKLL 56  Rickettsia conorii
15892194     --------------------------------------------------------------------------------     Rickettsia conorii
17545197 244 RSQHSLSLLNFGQQLIVAVALILILYRATQGVAAGHMTLGDLVLVNTLMLQIYIPLNFLGVIYRELKQAVTDMDRMFKLL 323 Ralstonia solanacearum
19115200 342 KVASSLAFLNSGQAIIFSTALTLMMYMGCRGIVTSNLTVGDLVMINQLVFQLSIPLNFLGSVYREMRQAFTDMEQLFSLK 421 fission yeast
19075871 158 KVLFSLNFLNIVQGGIFTFSLAIACLLSAYRVTFGFNTVGDFVILLTYMIQLQQPLNFFGTLYRSLQNSIIDTERLLEIF 237 fission yeast
16122801 280 KNQISFTVLSFGQTAIISVGLIVMMAMAAQGIVQGQMTIGDFVLVNAYLLQLYQPLNFFGFIYSEIRQALIDMENMLDLL 359 Yersinia pestis
1352002  414 KNEVKIKNA--ERPLMLp-eNVPYDITFENVTFGYHPDRKILKNASFTIPAGWKTAIVGSSGSGKSTILKLVFRFYDPES 490 baker's yeast
17987775 342 DVKQEVKDKpgAPALK----VDSGAISFKDVHFAYDPQRPILRGISFDVPAGKTVAIVGPSGAGKSTISRLLFRFYDIQS 417 Brucella melitensis
16125563 376 RQAADVADApdAQDLPPcadQRGGAVAFEAVSFRHGARSEGLSEVSLTVAPGSTVAIVGPSGAGKTTLVRLALRMIDPQS 455 Caulobacter crescen...
15892191  52 PYLWSKDFDirLRIVTS---LICLVIAKVINIFVPIVYKYIINGLNKNFALSVMIGIIVAYGGTKILVQQ---------- 118 Rickettsia conorii
15892193  57 DIPVEVEDAlnAKELIIl-kGA---VSFDNVSFAYNQARPILHNISFTIKSGKTLAVVGSSGTGKSTISRLLFRFYNINS 132 Rickettsia conorii
15892194     --------------------------------------------------------------------------------     Rickettsia conorii
17545197 324 HTNREVADRpdAQPLA----VRAGEVRFAHVDFGYESNRQILFDVDFTIPAGTTTAVVGQSGSGKSTLARLLFRFYDATS 399 Ralstonia solanacearum
19115200 422 RINIQVKEApdARDLVLk-gGS---IQFDNVHFSYNPNRPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDS 497 fission yeast
19075871 238 EEKPTVVEKpnAPDLK----VTQGKVIFSHVSFAYDPRKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVNS 313 fission yeast
16122801 360 MVKQEITDRpdALPLQ----LTKGEVRFDAVSFSYDPRRPILNNVSFTIPPGKTVAIVGASGAGKSTLARLLFRFYDVTA 435 Yersinia pestis
1352002  491 GRILINGRDIKEYDIDALRKVIGVVPQDTPLFNDTIWENVKFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERG 570 baker's yeast
17987775 418 GSITIDGQDVRDVTQESLRKFIGMVPQDTVLFNDTIAYNIRYGRTDASEEDVEKAAELAQIAGFIKHLPDGYKSMVGERG 497 Brucella melitensis
16125563 456 GRVTLDGYDLKALKQSSLRRAVALVPQDVALFNDTLAANIAFARPEVGETEVWAAAEAAELGDFIRSLPEGMATKVGERG 535 Caulobacter crescen...
15892191     --------------------------------------------------------------------------------     Rickettsia conorii
15892193 133 GNVTIDGQDIREVTQQSLRKSIGIVPQDTVLFNDTRYITTSHTVIIQQATMKL--------------------------- 185 Rickettsia conorii
15892194     --------------------------------------------------------------------------------     Rickettsia conorii
17545197 400 GAIQIDGQDVRDVTQASVRAAIGIVPQDTVLFNDSIYYNIAYGRPDATREEVIAAARAAQIHGFVESLPEGYDTPVGERG 479 Ralstonia solanacearum
19115200 498 GKILIDNQRLDQITLNSLRKAIGVVPQDTPLFNDTILYNIGYGNPKASNDEIVEAAKKAKIHDIIESFPEGYQTKVGERG 577 fission yeast
19075871 314 GSITIDDQDIRNVTLSSLRSSIGVVPQDSTLFNDTILYNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSRVGERG 393 fission yeast
16122801 436 GAVYLDDQDIRGVTQSSLREAIGIVPQDTVLFNDTLRYNIGYGKTDSTDEEIERAAKLAHIHEFIISLPDGYETRVGERG 515 Yersinia pestis
1352002  571 LMISGGEKQRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFtsGSRTSVYIAHRLRTIADADKIIVLDNGRV 650 baker's yeast
17987775 498 LKLSGGEKQRVAIARTILKAPPILILDEATSALDTATEQEIQSALDIVS--RGRTTLVIAHRLSTVIGADEIIVLKDGLI 575 Brucella melitensis
16125563 536 LKLSGGERQRVGIARALLAEPRVLILDEATSALDSRTEAAIQATLRKAR--AGRTTLVVAHRLSTIADADEIVVLRRGKI 613 Caulobacter crescen...
15892191     --------------------------------------------------------------------------------     Rickettsia conorii
15892193     --------------------------------------------------------------------------------     Rickettsia conorii
15892194   1 -------------------------MMRQQVRLVLKAEKLIQARLKEIS--DHHTTLIIAHRLSTIIDADEIIVLDNGYI 53  Rickettsia conorii
17545197 480 LKLSGGEKQRVAIARTLLKRPPILVFDEATSALDSRTEHAIQEELMRLA--QNHTTLVIAHRLSTIVGAHQILVMEHGRI 557 Ralstonia solanacearum
19115200 578 LMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNIND--------------------------------- 624 fission yeast
19075871 394 LKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRLA--SGRTAIVIAHRLSTITNADLILCISNGRI 471 fission yeast
16122801 516 LKLSGGEKQRVAIARTILKKPSILVFDEATSALDTHTEREIQSHLREVS--RDHTTLVIAHRLSTIIDADEIIVLEAGSI 593 Yersinia pestis
1352002  651 REEGKHLELLAMpGSLYRELWTI 673 baker's yeast
17987775 576 AERGTHRHLLDQ-KGLYASMWDR 597 Brucella melitensis
16125563 614 VERGRHEALLAA-GGEYAALWRR 635 Caulobacter crescentus CB15
15892191     -----------------------     Rickettsia conorii
15892193     -----------------------     Rickettsia conorii
15892194  54 VERGNHKTLLQH-KGYYAELWYK 75  Rickettsia conorii
17545197 558 IERGTHASLLRA-EGRYAQMWRM 579 Ralstonia solanacearum
19115200     -----------------------     fission yeast
19075871 472 VETGTHEELIKRdGGAYKKMWFQ 494 fission yeast
16122801 594 VERGRHDELLLK-NGRYAGMWQN 615 Yersinia pestis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap