1JF9,1KMJ,1C0N


Conserved Protein Domain Family
CsdA

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COG0520: CsdA (this model, PSSM-Id:223594 is obsolete and has been replaced by 440286)
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Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 223594
Aligned: 89 rows
Threshold Bit Score: 174.424
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JF9_A     3 MIFSVDK-------------VRADFPVLSREVn--------GLPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGI 60  Escherichia coli
15843319   5 AMRRSGA-------------NSPAGDSLADRwraa---rppVAG-LHLDSAACSR-QSFAALDAAAQHA-RHEAEVG--G 63  Mycobacterium tuber...
15596010   3 ALFPAAPda----------fGADELLRLRRET---------PAWGSYAHFAHGSAsLPPQVLYEALDS--WLEAERRWGV 61  Pseudomonas aerugin...
15597590  16 AGLPLLSaaqslraegvpsdAGNKWKALRQQFd-------lDPQYLHFANFLLTS-HPRPVREAIERLRVRFDRNPGEAV 87  Pseudomonas aerugin...
15598154   1 --------------------MNCYQDEFDQTN-----------GLRYLNHAAVAP-WPRRAADAVSAFAR---ENVAHGA 45  Pseudomonas aerugin...
17548917   3 SKWEFKD-------------SPKAFRSRFLLD-----------PSVTCLNHGMLGaCPAEVLEQQNALR---ARIERQPA 55  Ralstonia solanacearum
15610836   1 -MRRSGA-------------NSPAGDSLADRwraa---rppVAG-LHLDSAACSR-QSFAALDAAAQHA-RHEAEVG--G 58  Mycobacterium tuber...
15898990   2 RLRDPRE-------------FRENVPVTRK--------------YVYLNHASVSP----TPLPSLFEAYRYLYEVANRGS 50  Sulfolobus solfatar...
17230702   2 TILNSNL-------------SMTSISTLQTRLhshreqfpaLANKTYFNYGGQGP-MPQGAMDIITQSL-TYIQQIGPFG 66  Nostoc sp. PCC 7120
16330317   1 ---------------------MADPVNLIPdrqq----fpgLANKTYFNFGGQGI-LPTVALEAITAMY-GYLQENGPFS 53  Synechocystis sp. P...
1JF9_A    61 HTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNsnVRAG-DNIIISQMEHHANIVPWQMLCARV 139 Escherichia coli
15843319  64 YVAAEAAAAVLDAGRAAVAALSGLP-DAEVVFTTGSLHALDLLLG------SWPg--ENRTLACL-PGEYGPNLAVMAAH 133 Mycobacterium tuber...
15596010  62 QRAAEHFAEPLLAVRDSVARVLGTQP-RHIALLDCASRAWSVAFAAALA--AHPR-IRAISSFDEYGSNSLCLLAARQQR 137 Pseudomonas aerugin...
15597590  88 DWHREEIWKYEDEARAWAGRYFAVQP-GQVALTGSTTDGLAAIYGGLL---VQPG-KEILTSSHEHYSTYTTLEYRHKRM 162 Pseudomonas aerugin...
15598154  46 SDYPEWLK-IEHRLRERLARLLNARAgSDLALVKNTSEALSFVAFGLD---WREG-DQVVIGNEEFPSNRVVWEALRPR- 119 Pseudomonas aerugin...
17548917  56 AFILRELTGLLDEARQALAGLIAADP-ADLALLPNVTTALSAVLRSRA---FAPG-DEILTTSHAYLSCTNLLDFVARET 130 Ralstonia solanacearum
15610836  59 YVAAEAAAAVLDAGRAAVAALSGLP-DAEVVFTTGSLHALDLLLG------SWPg--ENRTLACL-PGEYGPNLAVMAAH 128 Mycobacterium tuber...
15898990  51 IAVNEEEEDELYHIRSKISNLVGAYS-DEISLIPNTSYGVNLVAHGL----EWKGdDNIVTDNLEFPTVVYPFLKLTKK- 124 Sulfolobus solfatar...
17230702  67 TEAGNWITRQTQAVREAIASELNAS-SDTITFTDNVTVGCNIALWGI----PWQAgDHILLSDCEHPGVIAATQEISRRF 141 Nostoc sp. PCC 7120
16330317  54 IAANQYIQQLIAQLRQALGETFNVD-PNTITITDNVTTGCDIVLWGI----DWQKgDEILLTDCEHPGIIAIVQAIAARF 128 Synechocystis sp. P...
1JF9_A   140 GA--ELRVIPLN-PDGTLQLETLPT----LFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHG--------AKVLVDGA 204 Escherichia coli
15843319 134 GF--DVRPLPTL-QDGRVALDDAAFml-aDDPP--DLVHLTVVASHRGVAQPLAMVAQLCTELK--------LPLVVDAA 199 Mycobacterium tuber...
15596010 138 GL--ELRLIDARgDAAQLLQRLDEQlh-dLAPGQTPLLSLSAVPTGHGAATALEGVAERIRAHD--------GLFFLDAS 206 Pseudomonas aerugin...
15597590 163 GT--QVREFPLFkDPHRVSADEILSsiaaQIRPQTRVLGMTWVQSGSGVKLPIREIGKLVRELNqkrdeqdrIIYVVDGV 240 Pseudomonas aerugin...
15598154 120 GV--EVVEVGLAgDDPESALLAACG-------PRTRLLSISAVQYASGLRLDLERIGAGCRRRG--------VLFCIDAI 182 Pseudomonas aerugin...
17548917 131 GArvVTAIVPTPvTHADAVVDAVLE----RVTPRTRLAVLDHVTSPTGMVFPIAALVERLAARG--------VDTLVDGA 198 Ralstonia solanacearum
15610836 129 GF--DVRPLPTL-QDGRVALDDAAFml-aDDPP--DLVHLTVVASHRGVAQPLAMVAQLCTELK--------LPLVVDAA 194 Mycobacterium tuber...
15898990 125 GV--KINIVETN--PYTFEEDIISH-----IDKNTRLVAISHVSFNTGLKVDVRKIVKAARENN--------TLVLLDII 187 Sulfolobus solfatar...
17230702 142 GV--EVTTCP-L-KSTLNEGEPTTIia-qHLRKNTRLVVLSHVFWNTGQVLPLDKIVEVCRNNN--------SLLLVDAA 208 Nostoc sp. PCC 7120
16330317 129 GV--TYRFFP-V-ADTLNQGDAAAVlv-nHLGPKTRLVILSHLLWNTGQVLPLGEIMAVCRRHQgd----ypVRVLVDGA 199 Synechocystis sp. P...
1JF9_A   205 QAVMHHPVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEALLQEM--------PPWEGGGSMIATVSLSE--GTTWTKAP 273 Escherichia coli
15843319 200 QGLGHVDC---AVGADVTYASSRKwIAGPRGVGVLAVRPELMerl-----rarLPAPDWMPPLTVAQQLG---FGEANVA 268 Mycobacterium tuber...
15596010 207 HAVGQLPLAVEATGCDVLVFPPRKwLRGPKGLGVLYLGERALERLa-------LPDGLDVGGAQWSDAFA---LQARDDA 276 Pseudomonas aerugin...
15597590 241 HGFGVEDVSFADFDCDYFIAGTHKwLFGPRGTGVIIARSEQLQEH----------LVPSIPTFSRADN---------FGT 301 Pseudomonas aerugin...
15598154 183 QQLGALPFDVQAYDCAFAMADGYKwMLGPEGLGVFYCHPEQRERL--------ALHEYGWHMLEHALDYErrDWRPARSA 254 Pseudomonas aerugin...
17548917 199 HAPGMLPLDVQAIGAAYYAGNCHKwLCSPRGAGFLHVRRDRHDGL--------HPTVISRGYGATGTGRP--RLHLEFDW 268 Ralstonia solanacearum
15610836 195 QGLGHVDC---AVGADVTYASSRKwIAGPRGVGVLAVRPELMerl-----rarLPAPDWMPPLTVAQQLG---FGEANVA 263 Mycobacterium tuber...
15898990 188 QSAGAVKINVKELGIDFAIAGGYKwLMSPQGSGFIYVKRGLIEDP---------PFYGWKTSADYLDFNPn-KFTLEKGP 257 Sulfolobus solfatar...
17230702 209 QSVGALPLNLTELGVDFYAFTGHKwLCGPEGVGGLYVRPEVRes--------lNPTFIGLYGIIVDNQAQ--PVSWKPDG 278 Nostoc sp. PCC 7120
16330317 200 QSAGSLPLDFSRLEVDYYAFTGHKwFAGPAGVGGLYIHGDAKGTAnaarlgeiNPTYVGWRSITYGSKGE--PTGWAEGG 277 Synechocystis sp. P...
1JF9_A   274 WRFEAGTPNTGGIIGLGAALEYVSALG-LNNIAEYEQNLMHYALSQLESVPDLTLYGPQ---NRLGVIAFNLGKHHAYDV 349 Escherichia coli
15843319 269 ARVGFSVALGEHLACGPQAIRARLAELgDIARTVLADVSG---WRVVEAVDEPSAITTLapiDGADPAAVRAWLLSQRRI 345 Mycobacterium tuber...
15596010 277 RRFECSEFNPGLRLALKASCDYLLQTD-VRRIARRNRQLRERIAQQLYRRLGWTPLEQGp--HASALMTYAAPELSGEQW 353 Pseudomonas aerugin...
15597590 302 LMTPGGYHAFEHRLALGTAFELHLQLG-KAEVQARIHQLNAYLKQRLGEHPKVRLVTPTspeLSSGFTFFRVEGRDCEAV 380 Pseudomonas aerugin...
15598154 255 RRFECGSPNMLGAMALEASLGLLEEVG-MERVGRDIAERVQWLQDGLSGIPGVRLHSPRnpsRRAGILTFSLDGQDNRTL 333 Pseudomonas aerugin...
17548917 269 LGTADPTPLLCIAHA-IRFLDGLLPGG-LPELMARNHALAIEGAQRMAEGLPLKRLAPDs--MVGSMVAFQLPET-PEPA 343 Ralstonia solanacearum
15610836 264 ARVGFSVALGEHLACGPQAIRARLAELgDIARTVLADVSG---WRVVEAVDEPSAITTLapiDGADPAAVRAWLLSQRRI 340 Mycobacterium tuber...
15898990 258 RRFEIGTVDLAANLSLAKSCEIIGENM--ELIESSVTNLSQFAIRLAKDHS-MEVITPEd--KRAGIVIVKVKKP--KEI 330 Sulfolobus solfatar...
17230702 279 RRYEVSTLAYPLYLGLKEAIATHQRWGtPQERYAQICHNSEYLWRSLAAIPNVKCLRDTppeTGIVSFQLHQTP--SLKL 356 Nostoc sp. PCC 7120
16330317 278 KRFEVATSAYPQYAGLLAALQLHQRQGtAEERYQAICQRSELLWQGLNQLPHVHCLATSppqAGLVSFTIDSPLG-HRAI 356 Synechocystis sp. P...
1JF9_A   350 GSFLDNYG-IAVRTGHHCAMPLMAYYNVPAM-CRASLAMYNTHEEVDRLVTGLQRIHR---L 406 Escherichia coli
15843319 346 VTTYAGVE-RAPLELPAPv-------------LRISPHVDNTADDLDAFAEALVAATAatsG 393 Mycobacterium tuberculosis CDC1551
15596010 354 LKRLHARGvNASYIGPQYARWALREQALPGV-LRLTPHYLTDDGEIERLGEALEDCLRqraA 414 Pseudomonas aeruginosa PA01
15597590 381 AKHLMAHR-VISDAVDRDVGPV----------VRLAPSLLNDEAEIDRVLEILAPQLA---- 427 Pseudomonas aeruginosa PA01
15598154 334 FETLRQERvICAQRG--------------GG-IRFSPHFYTSSTVIDDTLAILRQVAGt--- 377 Pseudomonas aeruginosa PA01
17548917 344 SGDAAASLqRWLYDAHRIDVAAAAWPAAHSRvLRVSAQIYNAIDDFIRLGDVLRRAPEhlqD 405 Ralstonia solanacearum
15610836 341 VTTYAGVE-RAPLELPAPv-------------LRISPHVDNTADDLDAFAEALVAATAatsG 388 Mycobacterium tuberculosis H37Rv
15898990 331 AKELLKENiVVSPRG--E----------G---IRISTHFYNTEEEVQKTIEKISELERkfn- 376 Sulfolobus solfataricus
17230702 357 VQFLDSQK-ILTRTIADPSc------------IRVTVHYLTLESEIDQLVEAIARFSV---- 401 Nostoc sp. PCC 7120
16330317 357 VQKLEEQR-IYLRTIADPDc------------VRACCHYITNEEEIEHLLSRLAEFTP---- 401 Synechocystis sp. PCC 6803
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