Conserved Protein Domain Family
PBP_1a_fam

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TIGR02074: PBP_1a_fam 
penicillin-binding protein, 1A family
Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Statistics
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PSSM-Id: 273955
Aligned: 20 rows
Threshold Bit Score: 667.04
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O66874        62 KRFYVSIDKIPEHVINAFVATEDRNFWHHFGIDPVAIVRAAIVNYRAg----R-IVQGGSTITQQLAKNLFLT---RE-- 131  Aquifex aeolic...
O87579        67 RREFTKIGDFPEVLRNAVIAAEDKRFYQHWGVDVWGVARAVVGNIVSg----S-MQSGASTITQQVAKNFYLS---SE-- 136  Neisseria lact...
Q04707        70 RRVNAQANDIPTDLVKAIVSIEDHRFFDHRGIDTIRILGAFLRNLQSn------SLQGGSTLTQQLIKLTYFStstSD-- 141  Streptococcus ...
WP_002858576  62 HRFYAPYEELPPRLIEALVAIEDTSFFEHNGVNIDAIFRAAVKIIKSg----GkTMEGASTLTQQFIKNTELT---PE-- 132  Campylobacter ...
EFR90282      95 RREYIEYKDIPETLKNAILTTEDARFYEHDGIDPIRLGGAVVANVTDg----F-GAEGASTLSQQIIKMSYLDy--TN-- 165  Listeria innoc...
WP_010897370  62 DREPVSILDVPDHVKHAFIAIEDARFHDHQGIDFRAIGRALYRDMLAg----E-KLEGGSTITQQLVKNAFLD---HE-- 131  Bacillus halod...
WP_010897863  90 RRIQVNYQDIPEELEEAFISVEDVRFRDHFGIDLRRIGGAIAANITSg----F-GSEGASTITQQLVKNVFLT---NE-- 159  Bacillus halod...
WP_003744490  95 DATFVSIDKISKNLQNAVVSIEDRKFYEHKGFDLKGIARAGVNLVTSg----G-ISGGGSTITQQLAKNALLT---QE-- 164  Listeria monoc...
WP_010965598  92 RRYVVSIKDMPKNLSNAFVSIEDERFYKHSGIDTKRILGAFYNDIKSkihkqN-SIQGASTITQQLIKNRMFL---NDsl 167  Clostridium ac...
WP_002657480  75 NRELMPLRKMPDNLINTLLIREDIGFFSHRGFSLIGIFRAAFNIVLG-----R-YFSGGSTLTQQLAKLLYTNq--AR-- 144  Lyme disease s...
O66874       132 ---RTLERKIKEALLAIKIERTFDKKKIMELYLNQIYLGSGAYGVEAAAQVYFGKHVWE--LSLDEAALLAALPKAPAKY 206  Aquifex aeolic...
O87579       137 ---KTFTRKFNEALLAYKIEQSLSKDKILELYFNQIYLGQRAYGFASAAQIYFNKDVRD--LTLAEAAMLAGLPKAPSAY 211  Neisseria lact...
Q04707       142 ---QTISRKAQEAWLAIQLEQKATKQEILTYYINKVYMSNGNYGMQTAAQNYYGKDLNN--LSLPQLALLAGMPQAPNQY 216  Streptococcus ...
WP_002858576 133 ---RTIARKIREALLAYKMETILTKEQILERYLNFIFFGHGYYGVKTAALGYFHKNLNE--LSLKEIAMLVGMPKAPSSY 207  Campylobacter ...
EFR90282     166 ---KTLARKAQEAWLALQLEEKYSKNDILEIYVNKVYMSDRVHGMQTAAEHYFGKNVKD--LTLAETALLAGMPQSPNNY 240  Listeria innoc...
WP_010897370 132 ---KTWLRKTKEVLIAMNLERRYSKSAILEFYLNQIYFGHGAYGIQSAANLYFDKDVSD--LTVEEGAVLAGLAKAPTIY 206  Bacillus halod...
WP_010897863 160 ---KALTRKIQEQYLAVKLEQQYSKNQILEMYLNQIYLGQGVYGVEQASQYYFGKSITDdsFSLADAALLAAIPRRPSFY 236  Bacillus halod...
WP_003744490 165 ---QTFTRKAKEIFMAREIEKTYSKDEIMEMYLNRSYFGNGEWGVENASLKYFGKSAAD--LNIPEAATIAGLLQAPSAY 239  Listeria monoc...
WP_010965598 168 enrISFKRKIQEAYLSIKLEQSLSKSQILEAYMNTIFLGVQANGVEAASRQYFNKSAKD--LNLIECAFIAGLAQSPSAY 245  Clostridium ac...
WP_002657480 145 ---RSILRKLHEIWWAIQLEKKLSKYEILEKYLNKVYFGNGNYGIVAASKFFFGKSVNK--INTAESVMMIIQLPNAKLY 219  Lyme disease s...
O66874       207 NPF-----YHPERALQRRNLVLKRMLEEGYITPEQYEEAVNKPL---T---VKKEN------K-Y---KFSDYF----LD 261  Aquifex aeolic...
O87579       212 NPI-----VNPERAKLRQKYILNNMLEEKMITLQQRDQALNEELh-yE---RFVQK------I-D---QSALYV----AE 268  Neisseria lact...
Q04707       217 DPY-----SHPEAAQDRRNLVLSEMKNQGYISAEQYEKAVNTPItdgL---QSLKSas--nyP-----AYMDNY----LK 277  Streptococcus ...
WP_002858576 208 DPT-----KHLDLSISRANNVISRMYNLGWISKADYDTAIKEIPqvyD---DTLT---------Q---NAAPYV----VD 263  Campylobacter ...
EFR90282     241 NPY-----DHPEAAKKRRDQVLTNMYTHDKISKEEMTTAQKSPIttgL---RSKKD------R-EdkiYKYDSY----VT 301  Listeria innoc...
WP_010897370 207 SPI-----IDLERSKQRRDLVLTVMQRQGFITAEEAVRAKGRLIqldV---NEP-A------E-E---EAYLTY----ID 263  Bacillus halod...
WP_010897863 237 DPV-----VNPENAESRRNLVISMMADQGKITAEEAEAARSIPIaeqL---NVQER------E-S---YPFEAF----YN 294  Bacillus halod...
WP_003744490 240 DPY-----QHIDKATNRRNMVLNAMVETGTISKAEGDKYKATKIvlnD---QSKDP------L-A---NKYPWY----VD 297  Listeria monoc...
WP_010965598 246 YPFsqnvaKNPNIYLDRTKLVLYKMRQNNYIDFSTYQNAINDLNnnkLafsQQKIS------N-K---YTYEWFsipvVN 315  Clostridium ac...
WP_002657480 220 SPL-----YNPEFSKKIQRAVLNQVVSNGIVKAEIAEKEFNEYWqnyD---WTRMAdtsaisNkK---DQAPYF----SE 284  Lyme disease s...
O66874       262 MVKSYVFNKY---G---Ei-------AYKGRLKIYTTIDLDYQKIAQKSLEEGLKRVAK-IIGLpflpkseedmelayek 327  Aquifex aeolic...
O87579       269 MVRQELYEKY---G---Ed-------AYTQGLKVYTTVRTDHQKAATEALRKALRNFDR-GSSYrgaesyidlgrdedae 334  Neisseria lact...
Q04707       278 EVINQVEEET---Gynl----------ltTGMDVYTNVDQEAQKHLWDIYNTDEYVAYP-DDE----------------- 326  Streptococcus ...
WP_002858576 264 EVIKQLSPNI---K---D--------LKTGGYKIILNIDLDVQNMAQNALKFGYDEIVK-RDKDan-------------- 314  Campylobacter ...
EFR90282     302 QVLSEIPKEY---D---V---------YRDGLTIYTALDRDAQEYTEKMLNTNKVVNFT-D--D---------------- 347  Listeria innoc...
WP_010897370 264 MVIDEAESQYhlsH---Qe-------FMTGGYTVVVPIDQAVQEVAFTLIHEKKYYPKG---NE---------------- 314  Bacillus halod...
WP_010897863 295 QVHKEVEEME---GisvNd-------LYNAGLKIYTTLDTEAQQHVEKVLQTDEFIQTY-PNKE---------------- 347  Bacillus halod...
WP_003744490 298 AVINEAVNEA---DitqDe-------IMQKGYKIYTELDQNYQTSLENVYNNDGLFPSNaNDGT---------------- 351  Listeria monoc...
WP_010965598 316 QVKQDLKSQY---H---YtdeeidslLRDGGLKIYTTMNTSMESNVQNILDNNSTLKSY-SYADkng------------- 375  Clostridium ac...
WP_002657480 285 YIRQKILKYL---Pd-gAn-------IYKDGYSIYSTLDLEAQKYADKVTNDMINKART-MHNLnrssetiiinseivpv 352  Lyme disease s...
O66874       328 eaqlkrlkrgkiyvakilkydgnf----------------------mkveihgkklkgeikglnteghkyvfvkylggnr 385  Aquifex aeolic...
O87579       335 eavsqylsglytvdkmvpavvldvtkkknvviqlpggkrvtldrralgfaaravdnekmgedrirrgavirvrnnggrwa 414  Neisseria lact...
Q04707           --------------------------------------------------------------------------------      Streptococcus ...
WP_002858576     --------------------------------------------------------------------------------      Campylobacter ...
EFR90282         --------------------------------------------------------------------------------      Listeria innoc...
WP_010897370     --------------------------------------------------------------------------------      Bacillus halod...
WP_010897863     --------------------------------------------------------------------------------      Bacillus halod...
WP_003744490     --------------------------------------------------------------------------------      Listeria monoc...
WP_010965598     --------------------------------------------------------------------------------      Clostridium ac...
WP_002657480 353 vdaisdllgiknlringrqykklrkr------------------kfyednidliasfgailgidkidkatkeyiiknklt 414  Lyme disease s...
O66874       386 aeiipDLEGSLVSIDVKTGEIKAIVGGRS-YA--Y---SQFNRA--VKALRQPGSAIKP-V-IYLSALLKG--M-TQIST 452  Aquifex aeolic...
O87579       415 vvqepLLQGALVSLDAKTGAVRALVGGYD-FH--S---KTFNRA--TQAMRQPGSTFKP-F-VYSAALSKG--M-TASTM 481  Neisseria lact...
Q04707       327 ------LQVASTIVDVSNGKVIAQLGARH-QS--SnvsFGINQA--VETNRDWGSTMKP-ItDYAPALEYGvyD-STATI 393  Streptococcus ...
WP_002858576 315 ---lsTLNGAMVVVNHQSGDVLALVGGVD-YE--K---SNYNRA--TQSMRQPGSSFKP-F-VYQVAINLG--Y-SPMSE 378  Campylobacter ...
EFR90282     348 -----EMQAGIVLQDTKTGRVQAIGGGRN-QKv-T---RGYNYA--TQVKRSVGSTMKP-IaDYGPAFEYLd-W-STAHI 412  Listeria innoc...
WP_010897370 315 -----DAQSAFVLLDAQTGGVLAVQGGKD-YV--R---RGLNR---VNVPRQPGSTFKP-LaVFAPALEEG--RaEPYSL 377  Bacillus halod...
WP_010897863 348 -----DFQAGITLVDTQTGEIKAIGSGRE-NTnvQ---RGFNYA--TDIKRQPGSTIKPiL-DYGPVIEYLq-W-STGRI 413  Bacillus halod...
WP_003744490 352 -----LVQSGAVLMDPATGGIRALVGGRGeHV--F---RGFNRA--TQMKAQPGSTMKP-LaVYTPALQSG--Y-DVDSM 415  Listeria monoc...
WP_010965598 376 ---iiQPEAAATLFDYHTGEIKAIVGGRG-QQp-P---SSYNRAdsSNYLRSVGSSIKP-LtVYAPAIDTK--LaTEDTI 444  Clostridium ac...
WP_002657480 415 pkliaQPEGAMIAIDTTSGAIRAMVGGSG-HT--Kd--NEFNRA--TQAKVQPGSAFKA-L-YFAAAIDLKk-I-TAATM 483  Lyme disease s...
O66874       453 IDASS------KPY-YdpS----KgE-DWIPKNYDEKEYGNVTLRYALAHSINTAAVNLLDKVG-FELVLEVGKKVGLD- 518  Aquifex aeolic...
O87579       482 INDAP------ISLpGkgP----NgS-VWTPKNSDGRYSGYITLRQALTASKNMVSIRILMSIG-VGYAQQYIRRFGFK- 548  Neisseria lact...
Q04707       394 VHDEP------YNYpG-------TnT-PVY--NWDRGYFGNITLQYALQQSRNVPAVETLNKVG-LNRAKTFLNGLGID- 455  Streptococcus ...
WP_002858576 379 IADIS------RIF-E--GgagnN-E-DWKPKNEGGKFLGLITLKEALTRSRNLATINLALDMG-LDVLYSKLMEFGFK- 445  Campylobacter ...
EFR90282     413 LEDEP------YTY-T--G----G-T-PIN--NWDFGYKGPISVRQALYDSRNIPALKTLQAVG-LDKSEQFVNKLGIT- 473  Listeria innoc...
WP_010897370 378 LRDEL------RTY-----------D-GYEPHNFGDEYEEEVTLYDAITQSKNAPAVWLLNELG-IPTAKQYLQRQGFQ- 437  Bacillus halod...
WP_010897863 414 IKDEP------HQY-S--N----G-V-EF--KNFDGAYKGNMTMRQALAESRNVPAIKALQEVG-VERAAEFAESIGVE- 474  Bacillus halod...
WP_003744490 416 LKDEK------ITY-K--G----N----YTPTNVGGVYSGEVPMYKAVANSINAPAVWLLDQIG-IDKGVKSVEKFGIT- 476  Listeria monoc...
WP_010965598 445 VNDSPlssdvaEKY-G--S----N-GvPYNPHNDDGGYSGPVNLKTALTKSINLVAIKLEDKLG-LSTGAAYAQKFGLTl 515  Clostridium ac...
WP_002657480 484 FSDSP------VAFlN--K----NgE-VYAPGNYGGKWRGNVLTRQALALSLNIPALRILDRLGfDSAISYSSKLLGIT- 549  Lyme disease s...
O66874       519 N--L-K-----PYYSLALGTVE------V---TPLQLTAAYQVFANLGTECKPFFIKKIVDENGEVLEEN---------- 571  Aquifex aeolic...
O87579       549 PseL-P-----VSLSMALGTGE------T---TPLRIAEAYSVFANGGYRVSSYVIDKIYDSEGRLRAQMqpl-----va 608  Neisseria lact...
Q04707       456 YpsI-H-----YSNAISSNTTEsdkkygA---SSEKMAAAYAAFANGGTYYKPMYIHKVVFSDG-SEKEFs--------- 516  Streptococcus ...
WP_002858576 446 D--I-P-----PNLSIVLGSFG------I---SPLEYSKFYTMFGNYGTIKDPQIIRQVQDKTGKTIMEF---------- 498  Campylobacter ...
EFR90282     474 Yd-KgQ-----NVESNAIGANS------S---NPMQMAGAYAAFGNKGIYNKPHTVTKIVLSDGQTEIDT---------- 528  Listeria innoc...
WP_010897370 438 Ld---D-----EGLAIALGGLQd----gV---TPLELASAYQVFANGGKKREPYFIEAIYNREGEKMAEV---------- 492  Bacillus halod...
WP_010897863 475 IdqK-P-----MHESYGLGGFNt----gV---STLDMAGAYAAFGNGGKYIEPHTVRKIEFPDGRVI-DT---------- 530  Bacillus halod...
WP_003744490 477 VpeK-D-----RTLGLALGGMSk----gA---SPVEMATAYATFANNGAKPESHIITKIVDPSGNTVYEN---------- 533  Listeria monoc...
WP_010965598 516 Nn-D-D-----KSSIAALSLGE------IrgsNTTTMAAAYGVFGNNGLYSEPRLYRKVVDKTGKVLLEN---------- 572  Clostridium ac...
WP_002657480 550 DpkE-IektfpKVYPLALGVIS------V---SPIQMARAFAILGNSGSEIEPYGIRYIEDRAGRIITNEeasilakikn 619  Lyme disease s...
O66874       572 VPECEEVLPKPETRVPVDMLRAVVLE-GTARRAS-----VLDRIVAGKTGTTDD---------------FQ--------- 621  Aquifex aeolic...
O87579       609 gQNAPQAIDPRNAYIMYKIMQDVVRV-GTARGASa----LGRSDIAGKTGTTND---------------NK--------- 659  Neisseria lact...
Q04707       517 -NVGTRAMKETTAYMMTDMMKTVLTy-GTGRNAY-----LAWLPQAGKTGTSNYtdeeienhiktsqfvAP--------- 580  Streptococcus ...
WP_002858576 499 NSNERKVSDEAQSFLVLDMMRNVVEK-GTGRNAR-----VKDIEIAGKTGTTNK---------------SV--------- 548  Campylobacter ...
EFR90282     529 EPSSTVAMKESTAYMVSDVLKDVLSV-GTGTTAA-----VPGVPAAGKTGTTNIppeftsk-yyypsgaAR--------- 592  Listeria innoc...
WP_010897370 493 DRTETQVYSPQTAWSMTRMLESVVRE-GTGTSAQ------GIGALAGKTGTTSFpev---------egaTM--------- 547  Bacillus halod...
WP_010897863 531 TPESTQAMSDYTAYMISDMLKTAVES-GTGTVAS-----IPGLPLAGKTGTTNF---------------DReiqqkyglp 589  Bacillus halod...
WP_003744490 534 VPKTKQIISETVSNEMTSMLLDVINT-GTGQSAA-----VSGHEMAGKTGSTQVpfdd--------tsgTK--------- 590  Listeria monoc...
WP_010965598 573 NYSTRKVISPQSAYIMYDLLKGPVSAgGTGSYAR-----FGDMPVAGKTGTASD---------------SK--------- 623  Clostridium ac...
WP_002657480 620 KEHQTQIVSPQTAYIITDMMKSTIQY-GTLANQRytnlkNFKSDIAGKSGTTQN---------------WA--------- 674  Lyme disease s...
O66874       622 -----DAWFVGFSPYIVTGVWVGYDVK-K-S--LGkhMSGSRVALPIWIDYMKVVTRM 670  Aquifex aeolicus VF5
O87579       660 -----DAWFVGFNPDVVTAVYIGFDKP-K-S--MGragyGGTIAVPVWVDYMRFALKG 708  Neisseria lactamica
Q04707       581 -----DELFAGYTRKYSMAVWTGYSNRl--T--PLv-GNGLTVAAKVYRSMMTYLSEG 628  Streptococcus pneumoniae TIGR4
WP_002858576 549 -----DAWFCGLTPEIEAIIWYGNDNN-K-P--MRytEGGARTAAPVFREFLTQYIEK 597  Campylobacter jejuni
EFR90282     593 -----DSWFAGYTTNYSIAVWTGYDDK-K-K--Yv-sASEQKIAQRMFSKLMAHVSAN 640  Listeria innocua FSL S4-378
WP_010897370 548 -----DAWFAGYTPEAVGTVWMGYDIT-S-T--ESylKGGSRYSAKLFRDILSEATPQ 596  Bacillus halodurans
WP_010897863 590 sgavpDRWFAGYTTRYTAAVWTGFTEF-G-EenYLlsQEEQRIAMQIFKAVMEEVSSK 645  Bacillus halodurans
WP_003744490 591 -----DQWFVGYTPNLVGAVWMGYDKTdK-E--HYltTTSSAGVSSLAHYVMNSGLQY 640  Listeria monocytogenes
WP_010965598 624 -----NLWFCGLTPYYSAAVWVGNDQ-------PTklSLGSNDVAEIWGEIMKMANVN 669  Clostridium acetobutylicum
WP_002657480 675 -----DGWAIGYSPYITTAFWVGFDKK-GyS--LGisGTGTGLAGPSWGEFMAEYHKN 724  Lyme disease spirochete
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