Conserved Protein Domain Family
transpos_IS66

?
NF033517: transpos_IS66 (this model, PSSM-Id:411154 is obsolete and has been replaced by 468053)
IS66 family transposase
Members of this protein family are DDE transposases from the IS66 family insertion sequences, which typically consist of two accessary genes (TnpA and TnpB) and the third gene encoding the transposase.
Statistics
?
PSSM-Id: 411154
Aligned: 151 rows
Threshold Bit Score: 230.929
Created: 19-Oct-2021
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012217378  99 QP-ERRKAGR--K-PLPAyl--rrEPVEYdlPEDQrgCPCCGN-P-MHRIG-ED---VSEQLHV----EVKW-TVRKNVR 161 Burkholderia mu...
WP_076611106 106 QK-GRKGKTLemT-AHPD------EIIEL--VPDY--CTSCGNaL-QDFSPqKE---QSRQIVDi---PPIKaVFKEYQT 166 Psychroflexus t...
WP_076612387 101 QP-GHPGHAR----KKPTpns-ppIPITLd------kCPECGTpLgEPRKG-AE---QKRTVTDi---PLPDhIIYEIVY 161 Methanospirillu...
WP_011448519  99 gqpGHEGNGR----KRPAsns-psMNIPL----DS--CPECGThLnEPVNG-AE---QTRTITDi---PFPRhIVYEIHY 160 Methanospirillu...
WP_014556613 108 RSeGHEGTTR----PPPEpeetirVDQGY--------CPDCEQ-----ILS-NPenyVSQTVIDvp-lPVPT-TVVKYEL 167 Haloquadratum w...
WP_076612370  60 QKkGHKGVTR--QrAEPD------RQVEV--RMGR--CPYCDA-----ELG-DPvsvESKIIEEip-ePQPV-IVTEYKI 119 Methanosaeta ha...
WP_012289081  97 RKdGHNPEWR--SpPDPD------EEIEV--TSDC--CPECGDhF-DESVG------VSPRLVEevpdPQPP-EVTQYNR 156 Halobacteriaceae
WP_012289072  86 RKdGHDPEWR--StTDPD------EEIEV--TCDC--CPECGDhF-DESVG------VSPRLVEeipdPQPP-EITRYNR 145 Halobacterium s...
WP_014555098  91 KS-GHDPEWR--DaPDPD------REIEV--TCDC--CPDCGEaF-DESAG------VSPRLVEelpdPQPP-EVTQYNR 149 Haloquadratum w...
WP_008275162  86 QP-GHKGKTR--Kgf-------grIDRIQilQPSI--CSHCGQ---TELLI-EPvkvDSQQVAQl---VDKPiEVVEYHR 146 Crocosphaera ch...
WP_012217378 162 SKWACRHCerhaerTPVVLAPMPVQPIPGSHADASVIATVATAKYVDGMPLYRMQEALAR-WQIPVSRGTLAHWVIrPSG 240 Burkholderia mu...
WP_076611106 167 FSKIC-NC------GCTSTADFPSGVNTSISYGENIEGLVAYFHARQFLPFARMQEVFNAvFNIHISEGGIHCLLN-RFS 238 Psychroflexus t...
WP_076612387 162 PRYWCGEC------KKLVRGEAP-WLPPKQHFGPAVACWIAYQRML-GLTIGKIQSSLLEtYGITMGESTILKLEK-WVA 232 Methanospirillu...
WP_011448519 161 PRYWCSTC------KKLVRGELP--LPPNQQFGPAVASWIAYHRML-GLTIRKIQSSLLEtYDIQMSEATILKLER-WVA 230 Methanospirillu...
WP_014556613 168 GKHHC-SC------GNEVVAEHP-DCPKKGRFGPNIMAQTALSRFHQRLPNRKQAELFDWeLDHPVSHRTIYNLTK-RVA 238 Haloquadratum w...
WP_076612370 120 AHYACPGC------HREVVASDP-DCPKEGIFGNNTIAQAAVLKYEERLPHRKIQNVLKRqYGLDISPATILDLTR-RAS 191 Methanosaeta ha...
WP_012289081 157 HRYQCDSC------GTETVATHP-DCPDEGQFGVNVIAQSALSRYDHRLPYRKITDRFEQlHGLELSGASAWHATE-RAA 228 Halobacteriaceae
WP_012289072 146 HYYQCDSC------GTETVAAHP-DCPDEGQFGVNVIAQSALSRYDHRLPYRKIADRFEQlHELELSGASAWHATE-RAA 217 Halobacterium s...
WP_014555098 150 HHYECHSC------GAETVASHP-DCPDEGQFGVNVIAQAALSRYDHRLPYRKIGDRFEQlHGLELSGASAWHSTE-RAA 221 Haloquadratum w...
WP_008275162 147 HHCRCGHC------GEVTKANWSPKTVPGQDLGVKLQAFLGWLGNYGHLPYEKQQEMLWElGQIEIGMGTIVATNQ-RVE 219 Crocosphaera ch...
WP_012217378 241 LHYSRLYDALRKTLLS-QPLIHGDETTVQVLkepgrsaQSKSYMWCYRSaqdcaEPGVLFEYQPG-RGQEHPKKFL-GDY 317 Burkholderia mu...
WP_076611106 239 DKTKPIYEIIKQRVCN-STVIGADETGVKVN-------RSKHWFWTWQT------PNLTYITHSRnRKGETVTTHFpNGF 304 Psychroflexus t...
WP_076612387 233 DTLHEDYEKIREEIVK-SSAVNADETSFRIG-------GTNGWLWVFTS-----TVGSYYMVAPT-RGHKVPEETL-EGF 297 Methanospirillu...
WP_011448519 231 DTLKEDYEKLKEKIIQ-ENNINADETSFRVN-------GENGWLWVFTS-----TIGSYYKVAST-RGHSVPEEVL-KGF 295 Methanospirillu...
WP_014556613 239 DRLRPAYNDIKEKIRE-SNVVYCDETGFPVD-------GEQHWAWTFVT-----DDEVLFWVDES-RGSGVLEDVLgEEF 304 Haloquadratum w...
WP_076612370 192 DAVRSEYEEILDRIRG-AEVLYVDETSIRVQ-------GKKHWIWAFTT------PTETFVVIRKsRGMKVLMEILtRRF 257 Methanosaeta ha...
WP_012289081 229 RAGRCEYEQIRREIQE-AEIVHVDETGIKRD-------GDQAWIWTFRT-----DEHTLYAVRES-RGSDVPAEVLgEDF 294 Halobacteriaceae
WP_012289072 218 RAGRCEYEQIRREIQD-ADVVHIDETGIKRD-------GEQAWIWTFKT-----AQHTLYAVRES-RGSDVPAEVLgEDF 283 Halobacterium s...
WP_014555098 222 RAGRCEYEQIRRQIQQ-AGVVHVDETGIKRD-------GEQAWIWTFTT-----EEHTLYAVRES-RGSDVPAEVLgEDF 287 Haloquadratum w...
WP_008275162 220 TAINPSVEQLSKWVKVeQPPIHVDETPWPVK-------GVKEWLWVFTN-----QLFCLFRAADT-RGRKELEDQLgHEY 286 Crocosphaera ch...
WP_012217378 318 -S-GMLMSDGYSAWRTLKKa------------THFGC-MAHARRLFVK--ADKAatkrtdsckqktpnarvaKALEY--F 378 Burkholderia mu...
WP_076611106 305 pN-STLVHDGWKPHLNTFAk------------NHQSC-LPHLQRRLNYlnLKYKsa---------------tWGLDF--S 353 Psychroflexus t...
WP_076612387 298 -E-GVLGRDAWKPYDVVKCeghqldllhvnrwLE-RAeIKHRIEPRTL--LSSRsakltk------pgrppgQFIDF--A 364 Methanospirillu...
WP_011448519 296 -N-GVLGRDAWKPYDVIMCsghqldllhvnrwLE-RAeIKHKIEPRSL--LTSQpvkilr------kgrppeKFLEF--V 362 Methanospirillu...
WP_014556613 305 aEdSTLSCDGWSAYSSYHT-------------KLQRC-WAHLSREAEY--VAERy----------------eEAERL--S 350 Haloquadratum w...
WP_076612370 258 -T-GIIVCDGWKPYAKFTK-------------RIQRC-WAHLLRESEY--LAEKia---------------eAAPLDkaL 304 Methanosaeta ha...
WP_012289081 295 -A-GTVICDGWTAYPAFSS-------------TLQRC-WAHLLREAED--VASDhee-------------aePVYRY--L 341 Halobacteriaceae
WP_012289072 284 -A-GTVICDGWTAYPAFSS-------------NLQRC-WAHILREAED--AAEKqae-------------gePIYHA--L 330 Halobacterium s...
WP_014555098 288 -A-GTVVCDGWTAYPAFSS-------------NLQRC-WAHILREAED--AADKqve-------------gePIYRA--L 334 Haloquadratum w...
WP_008275162 287 -G-GVLSSDDLGVYNGYTVv------------AQQKC-LAHLRRHFQR--LIKTpgqyn--------ktigqTFLKL--I 339 Crocosphaera ch...
WP_012217378 379 QALYRVEAlak--ddLPAGltraDYTYDLRQKHSAPLLEAFKAWLDELAPKVAPQSLLGKAIAYTRNQWEYLSRYVTDGC 456 Burkholderia mu...
WP_076611106 354 KLLYDALElkk--tlPFQN----KEYTIERAKI----IQKLQCLLEKPPD--KTHKELFSFYKRMRRERQHLFTFLFLEN 421 Psychroflexus t...
WP_076612387 365 DGIRSILKraveyteNDPPps-mEERKNACREF----QKEMKAFLDRKWT----DDDAIRISKELRKRLDMLFTFMDHEG 435 Methanospirillu...
WP_011448519 363 DGVRSILKkaveyteNDPPps-lDERKNARDKF----QAELTGLLERKWV----DPDVIRIFKELRKRQDMLLTFMVHED 433 Methanospirillu...
WP_014556613 351 EELHALHDdlttfveGEPSa---SAREQKRAEA----SLHLEGLIREDYE----VREVQQLIKKISNGLGHWLTFMTEPG 419 Haloquadratum w...
WP_076612370 305 RRLYRKLNdal--eaDPPP----ETRRQLWYIA----RAALRRWIRREYA----SEKVEKFINKIENGFEYWFTFVLRSD 370 Methanosaeta ha...
WP_012289081 342 KQMFVGLQswl--etDPDP----RARAQMHRAC----QDGLRSLVERSVT----DEPVATLLGKIEGGLDHWLTFVGEPA 407 Halobacteriaceae
WP_012289072 331 RQVYVALQarl--esDPSP----RERADLQRVA----RRELESLIERSVP----DGPVATLLGKIEGGLDHWLTFVGEPA 396 Halobacterium s...
WP_014555098 335 KQLYVALQt------RLES----DLTVRERAELQLVARRELESLIERSVP----DGPVATLLGKIERGLDHWLTFIGEPA 400 Haloquadratum w...
WP_008275162 340 DEAFRHYRiw---qnDKNR----HGYQVWARQF----KDKIKIATEEW--KPKAGYEAGKLLRNLRQKAEQWWYFLEHPE 406 Crocosphaera ch...
WP_012217378 457 APIDNNVIERDVRPFATSRKSWLFSDTVDGAKASATVYSLVLTCRACGVEPYDYLLHVLTEL 518 Burkholderia multivorans
WP_076611106 422 VPADNNASERAIRNVKVKQKISGQFKIEQAAQNFAQIRSVIDTIIKNGLNVLDELALIAKFE 483 Psychroflexus torquis
WP_076612387 436 VPWHNNDAERAIRQGVLHRKISGGRRTWTGAEVFEVILSTYETAKKRGERFIEMVRAKLDpp 497 Methanospirillum hungatei
WP_011448519 434 VPGHNNDAERAIRQGVLHRKISGGRRTWLGAEVFGVLLSIYETSKKQKENFMQLVGRKLGFE 495 Methanospirillum hungatei
WP_014556613 420 VDSTNNRAERALREQVVLRKMFRTLRSAEGVQIHETITTMLATWKRRGLDPPEQLQSILGGR 481 Haloquadratum walsbyi
WP_076612370 371 VEPTNNRAERALREHVVQRKIIGTLRNEKGTSIHERIMTVLTTWAQQGLNSFQMLRLKLMLS 432 Methanosaeta harundinacea
WP_012289081 408 VSPTNNAAENALREPVVLRKIIGTLRNDRGMFVHETILSLLATWRQQGRNPYEELTRVVHDN 469 Halobacteriaceae
WP_012289072 397 VSPTNNAAENALREPVVLRKIIGTLRNDRGMFVHETVLSLLATWRQQGRNPYEELRRVVSSN 458 Halobacterium salinarum
WP_014555098 401 VSPTNNSAENALREPVVLRKIIGTLRNDRGMFVHETLLSLLATWRQQGRNPYGEFKRVSQDN 462 Haloquadratum walsbyi
WP_008275162 407 IPPDNNLAERSLRLAITKRKVSGGSRSMERFKQTANLLTVIQTCRRQERSVIDFFEKSLIAK 468 Crocosphaera chwakensis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap