Conserved Protein Domain Family
FIP1

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COG5213: FIP1 
Polyadenylation factor I complex, subunit FIP1 [RNA processing and modification]
Statistics
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PSSM-Id: 227538
Aligned: 3 rows
Threshold Bit Score: 213.75
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1175470    1 MSN----ADQHMDVDEDEYLYGETIEERNDGVTVSNAKSPEQA-----------------------------SEESDDSD 47  fission yeast
19074939     --------------------------------------------------------------------------------     Encephalitozoon cun...
1169683    1 MSSsedeDDKFLYGSDSELALPSSKRSRDDEADAGASSNPDIVkrqkfdspveetpatarddrsdediysdsSDDDSDSD 80  baker's yeast
1175470   48 IEFIIETKP------------------GERAEPLGGSIATLGSTRPSAKPQVEKT--------AVEVKTTEPQDLSTAET 101 fission yeast
19074939   1 -------------------------------------MDVFGALWMQNDEEFFVG--------DQDDENTSSDLELIVEK 35  Encephalitozoon cun...
1169683   81 LEVIISLGPdptrldaklldsystaatSSSKDVISVATDVSNTITKTSDERLITEgeanqgvtATTVKATESDGNVPKAM 160 baker's yeast
1175470  102 APKVDIDAVPTIDGKNIFEIDLESFDDKPWRKPGADISDYFNYGFDEFTWAAYCAKQTTLRDDFSPQKFMASLA--QIPG 179 fission yeast
19074939  36 VPEKEEQKEETE-GQNILDYDIESFTDKPWNKPGADITDYFNYGFNEMTWKEYCNMQK---R---KSEFARGGS--EWTD 106 Encephalitozoon cun...
1169683  161 TGSIDLDKEGIFDSVGITTIDPEVLKEKPWRQPGANLSDYFNYGFNEFTWMEYLHRQEKLQQDYNPRRILMGLLslQQQG 240 baker's yeast
1175470  180 PLPSGNVPSPAEFQAMMASGFPPFMPIPPPIGGPQEDMGYSRNFPVHASSNyntthTSGGGVHSGAATPNAYVNNNPSSS 259 fission yeast
19074939 107 EKYRGVRRGFSEIKKDGDGDGPRGRRGSRDVGRRGSGEGQRWEGWSGRKE--------GGRGRRGDREERRYEERGEGRR 178 Encephalitozoon cun...
1169683  241 KLNSANDTDSNLGNIIDNNNNVNNANMSNLNSNMGNSMSGTPNPPAPPMHP-----SFPPLPMFGSFPPFPMPGMMPPMN 315 baker's yeast
1175470  260 RRESESPANSPN 271 fission yeast
19074939 179 QGYRDGGKRQ-- 188 Encephalitozoon cuniculi
1169683  316 QQPNQNQNQNSK 327 baker's yeast
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