1QCX,1IDK,1PXZ,1PCL,1PLU


Conserved Protein Domain Family
Amb_all

?
smart00656: Amb_all 
Click on image for an interactive view with Cn3D
Amb_all domain
Statistics
?
PSSM-Id: 214765
Aligned: 57 rows
Threshold Bit Score: 132.401
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1QCX_A         91 KVSVTYDkagilP--ITVN----------------------SNKSIVGQGTK----GVIKg----------------KGL 126  Aspergillus n...
CAA57439       73 LVITYNGne--dA--LIKAaeanicgqwskdprgveikeftKGITILGTNGS----SANF-----------------GIW 127  Pectobacteriu...
Q9Y891        111 KVSVKYDka-afS--PLIVg---------------------SNKSLIGQGSK----GVIKg----------------KGI 146  Colletotrichu...
Q9KGY5       1280 PETIYVDgv-itD--ANSGgdnssi-----------eikdmDNISIIGVADR----GELSg----------------IGI 1325 Pseudoalterom...
Q9KGY6        105 TSKVSGDs-------CNTGpdlie-------------lkeiSNVSIIGVGSG----ALFDq----------------LGI 144  Pseudoalterom...
Q04085         72 PLIITYSgn-edS--LIKA----------------------AEKNICSQWSK----DARGve--------------iKEF 108  Pectobacteriu...
YP_003002642   74 lVITYTGne--dS--LINA----------------------AAANICGQWSKdprgVEIKeftkgitiigangssanFGI 127  Dickeya zeae ...
XP_001402523  112 tVTYNTAge--lG--ITVN----------------------SNKSLIGEGTS----GVIKg----------------RGL 145  Aspergillus n...
1IDK_A         91 sVSVEYYna--gTlgITVT----------------------SNKSLIGEGSS----GAIKg----------------KGL 126  Aspergillus n...
AAF22244      108 KETWNKAar--qP--IDVG----------------------NNKTILGVGSK----GAIKg----------------KGL 141  Colletotrichu...
1QCX_A        127 RVVSgAk---NVIIQNIAVTDINPKYv---------------WGGDAITVDd-----SDLVWIDHVTTARi--gR----Q 177  Aspergillus n...
CAA57439      128 MVNS-S----NVIVRNMRFGYMPGGA----------------KDGDAIRIDn-----SPNVWIDHNEIFA----KnfecA 177  Pectobacteriu...
Q9Y891        147 RITN-Sa--kNVIVQNIHITQLNPQYv---------------WGGDAVSLDg-----SDLVWIDHVKTSL----Ig--rQ 197  Colletotrichu...
Q9KGY5       1326 AIRR-An---NIIIQNLKIHEVLTGGk------------------DGISIEgdenkpTANIWIDHNELYS----Sln--- 1376 Pseudoalterom...
Q9KGY6        145 HIRS-Ss---NIIIQNVHVRNVKKSGsp------------isNGGDAIGMEs----nVRNVWVDHVTLEA----Sg---- 196  Pseudoalterom...
Q04085        109 TKGT-YhpwnQRIVRQLRSLDCETLLkfwyvicalvtcraarKHGDAIRIDn-----TPNVWIDHNEIFA----KnfecA 178  Pectobacteriu...
YP_003002642  128 WIKK-Ss---DVVVQNMRIGYLPGGAk----------------DGDMIRVDd-----SPNVWVDHNELFAanheC----D 178  Dickeya zeae ...
XP_001402523  146 RMVSgVs---NIIIQNIAVTDINPEYv---------------WGGDAITLDe-----ADLVWIDHVTTARi--gR----Q 196  Aspergillus n...
1IDK_A        127 RIVSgAe---NIIIQNIAVTDINPKYv---------------WGGDAITLDd-----CDLVWIDHVTTARi--gR----Q 177  Aspergillus n...
AAF22244      142 RMRGs-----NVIIQNIEVSDLNHKYv---------------WGGDAIGFDg-----ADLVWVDHVTTARp--gR----Q 190  Colletotrichu...
1QCX_A        178 HIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDm-------VTLKGNYFYNLSGRMPKVQGNtLLHAVN 250  Aspergillus n...
CAA57439      178 GTPDNDTTFESAVDIKKASTNVTVSYNYIHGVKKVGLSGSSNTDtg----rnLTYHHNIYSDVNSRLPLQRGG-QVHAYN 252  Pectobacteriu...
Q9Y891        198 HIVLGNGANNRVTISNNEIDGSTSWSATCDNHHYWGVYLTGSNDm-------VTFKSNYIHHTSGRAPKIAGNsLVHVVN 270  Colletotrichu...
Q9KGY5       1377 ---vDQDYYDGLIDSKSGAENITISYNYIHDSWKTSLHGHSDDDsssnknrhITFHHNRFENIISRVPLFRFG-QGHIFN 1452 Pseudoalterom...
Q9KGY6        197 ---gESSGYDALFDMKNNTKYVTLSYSILRNSGRGGLVGSSDSDdan---gpVTFHHNYYQNINSRTPLLRHA-TAHAYN 269  Pseudoalterom...
Q04085        179 GTKDGDTTFESAIDIKKASTNVTISYNYIHGIKKVGLSGLSQRQrd----drLTRYR------FFASPDQRSR------- 241  Pectobacteriu...
YP_003002642  179 GTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDtg----rnITYHHNYYNDVNARLPLQRGG-LVHAYN 253  Dickeya zeae ...
XP_001402523  197 HYVLGTDADSRVSITNNYINGESDYSATCDGHHYWNVYLDGSSDk-------VTFSGNYLYKTSGRAPKVQDNtYLHIYN 269  Aspergillus n...
1IDK_A        178 HYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADl-------VTMKGNYIYHTSGRSPKVQDNtLLHAVN 250  Aspergillus n...
AAF22244      191 HYVFGFNPSKRITLSNNFINGESTYSTGCNGYHYWTFEMVGKDDq-------ITMKNNYIYKTTGRGPALSGGtLLHAVN 263  Colletotrichu...
1QCX_A        251 NLFHNFDGHAFEIG-TGGYVLAEGNVFQDVN 280  Aspergillus niger
CAA57439      253 NLYGGIKSSGFNVR-QKGIALIESNWFENAL 282  Pectobacterium carotovorum
Q9Y891        271 NYFYDNTGHAMEAD-AGAQVVLEGNIFQNVK 300  Colletotrichum gloeosporioides f. sp. malvae
Q9KGY5       1453 NYYNNITSSAINSR-MGAELHIENNYFEHTK 1482 Pseudoalteromonas haloplanktis
Q9KGY6        270 NYYSGIQSSGMNPR-IGGKIRAENNYFQDSK 299  Pseudoalteromonas haloplanktis
Q04085        242 --------CGFCAR-RHSSSRRAGRALPSLR 263  Pectobacterium carotovorum
YP_003002642  254 NLYTNITGSGLNVR-QNGQALIENNWFEKAI 283  Dickeya zeae Ech1591
XP_001402523  270 NYWENNSGHAFEIG-SGGYVLAEGNYFSNVD 299  Aspergillus niger CBS 513.88
1IDK_A        251 NYWYDISGHAFEIG-EGGYVLAEGNVFQNVD 280  Aspergillus niger
AAF22244      264 NVWEDINGHALEGGdANARGIFEGNAFIKVS 294  Colletotrichum gloeosporioides f. sp. malvae
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap