3B6N,1IV3,2UZH,3RE3,1T0A,1VH8,1W57


Conserved Protein Domain Family
YgbB

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pfam02542: YgbB 
YgbB family
The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).
Statistics
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PSSM-Id: 460584
Aligned: 613 rows
Threshold Bit Score: 101.663
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3B6N_A                    5 VRIGQGYDIHQIrvgppedivadttadtaantadpnkqSfKRLTIGGVPVET-ISVLSHSDGDVIFHALVDALLGGMSCS 83  Plas...
jgi:Jden_2074             7 pSVGIGTDVHAWapq---------------------ptS-RELWLGGILFPGePGLDGHSDADVIAHAAADALFSAAGMG 64 
BAG30217                 24 pLVGVGVDVHAFgt-----------------------eG-TALWIGGLHWPGeRGLSGHSDGDVVAHAAADAVFSAAGVG 79 
noaausda:RSal33209_0410   9 pRTGIGVDVHAYg------------------------eAtEELWLAGLFWPGeRGLSGHSDGDPVSHAAADALFSAAGVG 64 
CBT74757                256 pRVGNGIDVHAVse----------------------dpS-RQMWLAGLHFPEdIGLSGHSDGDAVAHAACDALFSAAGIG 312
jgi:Snas_0141             4 pEVGIGTDVHAYd------------------------aS-RPCFVAGLEWPDtPGLAGHSDGDVACHAACNALFSATGLG 58 
WP_012750740            275 pRVGIGTDVHAWape---------------------daP-RPLWLGGIHWPGeRGVAATSDGDVVAHAACNALLSAAGLG 332 Micr...
jgi:Arch_1661             5 MRVGTAIDTHAFsa----------------------dpH-RTLYLACLEWPGeQALEGHSDADVVAHAAADALLIASGIG 61 
A0LQZ7                    7 pRVGIGVDVHPFs------------------------pD-RPLWLAGLHWPGePGLAGHSDADVVIHALCNALLSAAGLG 61  Acid...
Q6ADI0                  233 pRIGFGTDTHAFd------------------------pS-AELWLAGLRWEGePGLAGHSDGDVVAHAIVDALLSAARLG 287 Leif...
3B6N_A                   84 DLGTLFPDGSPKYKNKNSLSFLRYARLLLYKRNYAIANVDIIVIAEVPKISPIREEIVRNISSAL-GiseSQVSLKGKTH 162 Plas...
jgi:Jden_2074            65 DLGTNFGTSEPQWAGASGARLLAEAARRVNEAGYRIGNVAVQLIGTRPKVGPYRSAMEQAMSQAA-G---APVRVSATTT 140
BAG30217                 80 DLGVHFGTDRPEFAGASGCRILAEAVRIVAEAGFTVGNISVQLVGNRPKFAPRREEAAAVLAEAA-G---APVHLSATTT 155
noaausda:RSal33209_0410  65 DLGTHFGADRPEYAGASGVILLAEAARIIRDAGFEIGNIAVQFVANKPKFSPRRAEAEAVLSEAA-G---APVSVSATTS 140
CBT74757                313 DLGTHFGVDRPEFAGASGVSLIAEAARLVREAGFEIGNVAVQFVGRRPRFAARREEANKVLSDAI-V---APVSVTATTS 388
jgi:Snas_0141            59 DLGSNFGVDRPEWSGASGPTLLREAAARVRAEGYSIGNVSIQLVGKYPRLGARRVEAEAVLTECL-G---APVRISAATT 134
WP_012750740            333 DLGAVFGVDRPEMADASGADMLREVLRLLTEAGLAVGNVAVQVVAPRPKVGTRRAEMEAALSAALgG---APVSVSAATT 409 Micr...
jgi:Arch_1661            62 ELGTVFGVDRPEWAGASGTALLTESVRLVANAGWTIMNVTVQLLGQKPRFAPRKMEAEKAMTAVV-G---APVSVSATTT 137
A0LQZ7                   62 DLGTQFGTAEPEWRDAAGTRLLTETVRLVRDAGYAVGNAAVQLLGERPKLRERRTEAEQLLTETV-G---APIALSAATT 137 Acid...
Q6ADI0                  288 DIGGVFGTGDPRFSGAHGEVFLTETRRLVEEEGFRIGNVSAQIVGNRPKFAPRRAEAETLLSRVL-G---APVSVSATTT 363 Leif...
3B6N_A                  163 EQLGPVGQKKAIECFANALLI 183 Plasmodium vivax Sal-1
jgi:Jden_2074           141 DGLGFTGRNEGLAALATALVY 161
BAG30217                156 DALGLTGRGEGIAAIATALVV 176
noaausda:RSal33209_0410 141 DALGFTGRGEGITAIATALVY 161
CBT74757                389 DGLGYEGEGKGVTAYATALVY 409
jgi:Snas_0141           135 DGLGFTGRGEGLAGTAVALVY 155
WP_012750740            410 DRLGFIGRREGLVGIATALVV 430 Micrococcus luteus
jgi:Arch_1661           138 DHLGFVGRKEGLAAIATALVV 158
A0LQZ7                  138 DGLGFLGRRDGLAAVATALVf 158 Acidothermus cellulolyticus 11B
Q6ADI0                  364 DGLGLTGRGEGVAVFATALLl 384 Leifsonia xyli subsp. xyli str. CTCB07
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