Clinical Description
DCX pathogenic variants cause an X-linked neuronal migration disorder neuroradiologically comprising an anterior predominant "agyria-pachygyria-band" spectrum of cortical malformations. This includes lissencephaly, referring to a "smooth brain" with a thick cortex and absent (agyria) and/or abnormally wide gyri (pachygyria) in hemizygous males with or without subcortical band heterotopia (SBH). Heterozygous females or rare males with mosaic or "mild" pathogenic variants present with diffuse thick or thin or anterior-predominant SBH, which may be accompanied by frontoparietal pachygyria [Koenig et al 2021].
To date, more than 300 individuals have been identified with a pathogenic variant in DCX [Gleeson et al 1998, Gleeson et al 2000]. The following description of the phenotypic features associated with this condition is based on these reports.
Affected Males
Males with a hemizygous DCX pathogenic variant are rare and usually present with early-onset epilepsy and/or developmental delay and behavioral disturbances with characteristic findings on brain imaging [Matsumoto et al 2001, Bahi-Buisson et al 2013].
Neuroimaging findings. Hemizygous pathogenic DCX variants result in diffuse or frontal-predominant agyria or pachygyria with thick cortex, also described as classic thick lissencephaly. Rarely, hemizygous males may present with a mixed cortical phenotype of frontal-predominant pachygyria and posterior (predominant) SBH [Di Donato et al 2018].
Neuropathologically, DCX-related lissencephaly consists of a thick four-layered cortex with an anterior more severe than posterior gradient and a relatively thin superficial cellular layer (layer 2) [Forman et al 2005].
Neurodevelopment. The severity of symptoms usually correlates with the degree of the underlying brain malformation observed on brain imaging.
Motor development is delayed but overall better than in individuals with PAFAH1B1-related lissencephaly / subcortical band heterotopia.
Leger et al [2008] reported on the development of 33 males with DCX-related lissencephaly:
At a median age of 7.5 years (range: 1.5-37 years) almost half were reported to walk independently; the remaining individuals showed moderate-to-severe motor impairment.
All affected individuals had significant cognitive and language impairment.
Almost half of the individuals in the study did not develop any speech.
Moderate behavioral disturbances including autistic features, sleep disorders, or agitation were reported in 30% of individuals, and extreme irritability in 12%.
Epilepsy. Epilepsy occurs in about 75% of affected males with two age peaks: either within the first six months of life (in about half) or at a median age of 6 years (range: 2-17 years) [Leger et al 2008]. Multiple seizure types have been observed, including infantile epileptic spasms syndrome (IESS) with or without characteristic hypsarrhythmia [Leger et al 2008, Dobyns 2010]. Seizures are intractable in more than half of affected individuals [Bahi-Buisson et al 2013]. Early seizure onset correlates with refractory epilepsy.
Other manifestations
Abnormal muscle tone with motor delays including limited mobility may result in contractures and scoliosis.
More severe clinical manifestations may also affect feeding and swallowing, thus resulting in insufficient nutrition or aspiration.
Head growth rate may decline postnatally and result in postnatal microcephaly in about 20% of affected individuals [
Leger et al 2008].
Life span. Males with classic thick lissencephaly may survive into adulthood. However, life span overall is shortened due to complications either directly related to the seizure disorder or resulting from disturbed cerebral regulation of vital functions (e.g., breathing abnormalities) or aspiration during respiratory infections or in association with food intake. In their cohort of 33 males with lissencephaly due to pathogenic DCX variants, Leger et al [2008] reported ten adults up to age 37 years at the time of examination.
Rarely, males may have milder cerebral manifestations of SBH similar to those in females [D'Agostino et al 2002, Aigner et al 2003].
Heterozygous Females
Most heterozygous females typically develop some clinical manifestations. The most common cortical malformation is SBH and variable anterior-predominant pachygyria. The phenotype of heterozygous females is usually milder than the classic lissencephaly phenotype in males. It is very variable between and to a lesser extend even within families and roughly correlates with the extent and thickness of the subcortical band as observed on brain imaging.
Bahi-Buisson et al [2013] proposed two distinct subgroups among females with DCX pathogenic variants: (1) a more severe clinical phenotype with thicker SBH usually observed in simplex cases and (2) a milder phenotype mainly observed in heterozygous asymptomatic females with normal brain MRI or only thin frontal subcortical bands.
Severe phenotypes associated with thicker SBH typically include the following:
Seizures, which eventually occur in more than 80% of affected individuals during childhood. They may include focal seizures, atypical absences, combined atonic and tonic seizures, and epileptic spasms and frequently are difficult to treat. Lennox-Gastaut syndrome seems to be independent of SBH thickness and has been reported in about 55% of females with thick bands and about 50% of those with thin bands. However, median age at first seizure appears to be earlier in the presence of a thick band (2.2 years) compared to those with thin bands (10 years).
Developmental delay and moderate-to-severe intellectual disability in almost all
heterozygous female probands
Severe language impairment and use, poor verbal skills, or absent speech in 84% of females with SBH with thick bands
Moderate-to-severe behavioral problems (about 60% overall and about 78% of females with thick bands); less frequently, autistic features or perseveration, stereotypic behavior, or automutilation are seen.
Truncal hypotonia or spasticity (about 29%)
Microcephaly (16%)
Hyperkinetic movements (less frequent than other features)
Neuroimaging findings. Heterozygous DCX pathogenic variants in females result in a diffuse thick (>8 mm) or thin (4-7 mm) frontal-predominant SBH [Bahi-Buisson et al 2013, Di Donato et al 2018], which may include frontal-predominant pachygyria.
Additional findings observed on brain imaging of female DCX heterozygotes may include [Bahi-Buisson et al 2013]:
Clinical variability. As in other X-linked disorders, X-chromosome inactivation has been postulated to contribute to inter- and intrafamilial phenotypic variability in females heterozygous for a DCX pathogenic variant. However, no convincing evidence for any diagnostic or predictive value of the assessment of X inactivation in individuals heterozygous for a DCX pathogenic variant has been identified to date. As an example, such variability has been observed in monozygotic female twins who were heterozygous for a recurrent pathogenic DCX nonsense variant [Martin et al 2004]. Both twins had thick generalized SBH, clearly delineated from the cortex by a small band of white matter. However, one twin had a thicker heterotopic band than the other, including frontal pachygyria associated with more profound cognitive and psychomotor impairment and a more abnormal EEG than observed in her twin sister.
Notable clinical variability has also been reported between female relatives of the same family; in one family with a heterozygous DCX pathogenic variant (p.Lys201Glu in the C-DC domain), the 78-year-old grandmother and her 50-year-old daughter had no seizures and normal IQ and neuropsychological profile in the presence of frontocentral SBH-pachygyria, while her 35-year-old granddaughter had bilateral predominant frontocentral SBH with mixed pachygyria on the overlying cortex and seizures beginning at the age nine years [Procopio et al 2024].
Milder phenotypes with virtually absent or less severe abnormalities on brain imaging (e.g., as thin frontal band heterotopia) may include the following:
In the cohort reported by Bahi-Buisson et al [2013], of 25 heterozygous mothers of probands, 14 (56%) were asymptomatic and had normal brain imaging, particularly in the presence of the missense pathogenic variant at position p.Arg196 (see Genotype-Phenotype Correlations).
Genotype-Phenotype Correlations
About one third of all DCX pathogenic variants are recurrent, resulting in similar pathogenic variant-specific cortical phenotypes in and between families [Bahi-Buisson et al 2013].
A slight effect of the type and location of the DCX pathogenic variant on the resulting severity of the brain malformation for both SBH and classic lissencephaly has been suggested [Leventer 2005, Bahi-Buisson et al 2013, Di Donato et al 2018].
DCX pathogenic
nonsense variants in males are very rare and have mainly been observed as
postzygotic mosaic events. Early truncating pathogenic variants result in severe lissencephaly as near-complete agyria, difficult to distinguish from severe lissencephaly due to
de novo pathogenic variants in
PAFAH1B1 or
TUBA1A.
Hemizygous
de novo pathogenic variants result in a more severe clinical presentation when compared to maternally inherited
DCX pathogenic variants.
Hemizygous
DCX missense variants within the N-terminal DC tandem repeat
domain tend to result in more severe forms of lissencephaly than missense variants in the C-DC domain.
Hot spot variants, observed multiple times, account for more than one third of identified sequence variants; these include p.Arg39Ter, p.Arg303Ter, p.Arg78Cys, p.Arg78His, p.Arg78Leu, p.Arg192Trp, p.Arg186Cys, p.Arg186His, and p.Arg186Leu [
Bahi-Buisson et al 2013].
Penetrance
Males. No instances of asymptomatic males with germline hemizygous DCX pathogenic variants have been reported, thus suggesting full penetrance of germline DCX pathogenic variants in males. However, males with postzygotic mosaic pathogenic variants may have milder clinical manifestations or, in rare cases, be asymptomatic. Mild clinical manifestations in the presence of hemizygous DCX pathogenic variants in the mosaic state have been anecdotally reported. As an example, a nine-year-old boy with thin subcortical band heterotopia and low hemizygosity (with a variant allele fraction of 13.6% for a p.Arg186His DCX pathogenic variant) developed focal seizures with motor onset primarily triggered by exercise at age 13 years [Miller & Kremer 2020]. Another example is a five-year-old boy with a de novo mosaic DCX deletion (c.30_31delAA) who was diagnosed with developmental delay and autism spectrum disorder and developed a seizure disorder at age 13 years. Brain imaging showed pachygyria of the frontal and temporal lobes [Zare et al 2019].
Females. Heterozygous females with germline missense or nonsense DCX variants may have no obvious brain malformation or seizures [Aigner et al 2003, Guerrini et al 2003].
Penetrance was reported to be less than 50% in mothers with a heterozygous or mosaic pathogenic variant in DCX whose children presented with DCX-related disorders [Bahi-Buisson et al 2013].
Nomenclature
Classic thick lissencephaly has been called lissencephaly type 1 in older publications. In the absence of associated intra- or extracranial malformations it is also termed isolated lissencephaly sequence.
Classic thick lissencephaly that occurs in combination with cerebellar hypoplasia is classified as lissencephaly with cerebellar hypoplasia.
Classic thick lissencephaly is morphologically and etiologically distinct from lissencephaly type 2, which is also called cobblestone lissencephaly, and from thin lissencephaly.
To emphasize X-linked inheritance, DCX-related lissencephaly and DCX-related SBH have variably been termed and abbreviated:
X-linked lissencephaly (XLIS) or lissencephaly, X-linked (LISX);
Isolated lissencephaly,
X-linked (ILSX);
Subcortical laminar heterotopia,
X-linked (X-SCLH);
Subcortical band heterotopia,
X-linked (SBHX).
DCX-related lissencephaly and DCX-related SBH have also been referred to as double cortex syndrome.