Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006533790.1
RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101994.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101995.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101996.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012731.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012732.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012733.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >gb|ACY91938.1| Fox-3 transcript variant 2 [Mus musculus]
...
Query length:
327 aa
DOMAINS: and other(s) domains
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RNA binding protein fox-1 homolog 3 isoform X6
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RNA binding protein fox-1 homolog 3 isoform X6 [Danio rerio]
317 aa protein
accession:XP_017210208.1
RNA binding protein fox-1 homolog 3 isoform 7 -1 homolog 3 isoform 7 [Homo sapiens] >ref|XP_063656052.1| RNA binding protein fox-1 homolog 3 isoform X14 [Pan troglodytes]
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RNA binding protein fox-1 homolog 3 isoform 7 [Homo sapiens] >ref|NP_001372755.1| RNA binding protein fox-1 homolog 3 isoform 7 [Homo sapiens] >ref|XP_063656052.1| RNA binding protein fox-1 homolog 3 isoform X14 [Pan troglodytes]
326 aa protein
accession:NP_001372754.1
Query: RNA binding protein fox-1 homolog 3 isoform X5 1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101995.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101996.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012731.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012732.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012733.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >gb|ACY91938.1| Fox-3 transcript variant 2 [Mus musculus]
...
RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101994.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101995.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101996.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012731.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012732.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012733.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >gb|ACY91938.1| Fox-3 transcript variant 2 [Mus musculus]
327 aa protein
accession:XP_006533790.1
RNA binding protein fox-1 homolog 3 isoform 2
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RNA binding protein fox-1 homolog 3 isoform 2 [Mus musculus]
326 aa protein
accession:NP_001034257.1
RNA binding protein fox-1 homolog 3 isoform 3 -1 homolog 3 isoform 3 [Mus musculus] >ref|XP_030101997.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus] >ref|XP_030101998.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus] >ref|XP_030101999.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus]
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RNA binding protein fox-1 homolog 3 isoform 3 [Mus musculus] >ref|NP_001272367.1| RNA binding protein fox-1 homolog 3 isoform 3 [Mus musculus] >ref|XP_030101997.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus] >ref|XP_030101998.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus] >ref|XP_030101999.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus]
313 aa protein
accession:NP_001020102.2
RNA binding protein fox-1 homolog 3 isoform 1 -1 homolog 3 isoform X1 [Mus musculus] >ref|XP_006533788.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_017170150.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_017170151.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_030101990.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >sp|Q8BIF2.2| RecName: Full=RNA binding protein fox-1 homolog 3; AltName: Full=Fox-1 homolog C; AltName: Full=Hexaribonucleotide-binding protein 3; Short=Fox-3; AltName: Full=Neuronal nuclei antigen; Short=NeuN antigen [Mus musculus] >gb|ACY91937.1| Fox-3 transcript variant 1, partial [Mus musculus] >gb|EDL34674.1| DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed, isoform CRA_a [Mus musculus]
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RNA binding protein fox-1 homolog 3 isoform 1 [Mus musculus] >ref|XP_006533785.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_006533788.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_017170150.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_017170151.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_030101990.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >sp|Q8BIF2.2| RecName: Full=RNA binding protein fox-1 homolog 3; AltName: Full=Fox-1 homolog C; AltName: Full=Hexaribonucleotide-binding protein 3; Short=Fox-3; AltName: Full=Neuronal nuclei antigen; Short=NeuN antigen [Mus musculus] >gb|ACY91937.1| Fox-3 transcript variant 1, partial [Mus musculus] >gb|EDL34674.1| DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed, isoform CRA_a [Mus musculus]
374 aa protein
accession:NP_001034256.1
DOMAINS: and other(s) domains
...
RNA binding protein fox-1 homolog 3 isoform X6 [Danio rerio]
317 aa protein
accession:XP_017210208.1
RNA binding protein fox-1 homolog 3 isoform 7 [Homo sapiens] >ref|NP_001372755.1| RNA binding protein fox-1 homolog 3 isoform 7 [Homo sapiens] >ref|XP_063656052.1| RNA binding protein fox-1 homolog 3 isoform X14 [Pan troglodytes]
326 aa protein
accession:NP_001372754.1
RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101994.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101995.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_030101996.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012731.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012732.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >ref|XP_036012733.1| RNA binding protein fox-1 homolog 3 isoform X5 [Mus musculus] >gb|ACY91938.1| Fox-3 transcript variant 2 [Mus musculus]
327 aa protein
accession:XP_006533790.1
RNA binding protein fox-1 homolog 3 isoform 2 [Mus musculus]
326 aa protein
accession:NP_001034257.1
RNA binding protein fox-1 homolog 3 isoform 3 [Mus musculus] >ref|NP_001272367.1| RNA binding protein fox-1 homolog 3 isoform 3 [Mus musculus] >ref|XP_030101997.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus] >ref|XP_030101998.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus] >ref|XP_030101999.1| RNA binding protein fox-1 homolog 3 isoform X6 [Mus musculus]
313 aa protein
accession:NP_001020102.2
RNA binding protein fox-1 homolog 3 isoform 1 [Mus musculus] >ref|XP_006533785.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_006533788.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_017170150.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_017170151.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >ref|XP_030101990.1| RNA binding protein fox-1 homolog 3 isoform X1 [Mus musculus] >sp|Q8BIF2.2| RecName: Full=RNA binding protein fox-1 homolog 3; AltName: Full=Fox-1 homolog C; AltName: Full=Hexaribonucleotide-binding protein 3; Short=Fox-3; AltName: Full=Neuronal nuclei antigen; Short=NeuN antigen [Mus musculus] >gb|ACY91937.1| Fox-3 transcript variant 1, partial [Mus musculus] >gb|EDL34674.1| DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed, isoform CRA_a [Mus musculus]
374 aa protein
accession:NP_001034256.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 653 | 653 | 100% | 0.0 | 99.69% | NP_001034257.1 | |
2 | 633 | 633 | 100% | 0.0 | 96.64% | NP_001372754.1 | |
3 | 474 | 474 | 100% | 1e-168 | 76.83% | XP_017210208.1 | |
4 | 638 | 638 | 100% | 0.0 | 87.43% | NP_001034256.1 | |
5 | 629 | 629 | 95% | 0.0 | 100.00% | NP_001020102.2 |