MIGS Cultured Bacterial/Archaeal sample from Yoken... - BioSample

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Result Filters

Organism: Yokenella regensburgei ATCC 43003
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yokenella; Yokenella regensburgei

Attributes

environmental package	missing
investigation type	bacteria_archaea
strain	ATCC 43003
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
collection date	not determined
local-scale environmental context	human-associated habitat [ENVO:00009003]
geographic location	not determined
environmental medium	biological product [ENVO:02000043]
project name	Yokenella regensburgei ATCC 43003
host	Homo sapiens
host taxonomy ID	9606 (9606)
estimated size	not determined
source material identifiers	ATCC 43003, JCM 3961
isolation and growth condition	not determined
number of replicons	not determined
reference for biomaterial	not determined
project_type	Reference Genome
misc_param: HMP supersite	gastrointestinal_tract
misc_param: HMP body site	not determined
finishing strategy (depth of coverage)	Level 2: High-Quality Draft127.1x;48
sequencing method	Illumina
assembly	Velvet v. 1.1.04
nucleic acid extraction	not determined
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf