uncultured cyanobacterium PMM_0083

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Result Filters

Organism: uncultured cyanobacterium
cellular organisms; Bacteria; Terrabacteria group; Cyanobacteriota/Melainabacteria group; Cyanobacteriota; environmental samples

Attributes

broad-scale environmental context	aquatic biome
collection date	not collected
environmental medium	microbial mat
geographic location	Antarctica
investigation type	metagenome-assembled genome
isolation source	microbial mat
project name	CCAMBIO
sample name	PMM_0083
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2023-02-03
ENA-LAST-UPDATE	2023-02-03
External Id	SAMEA112467289
INSDC center alias	University of Liege
INSDC center name	University of Liege
INSDC first public	2023-02-03T12:23:13Z
INSDC last update	2023-02-03T12:23:13Z
INSDC status	public
Submitter Id	PMM_0083
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	MEGAHIT;1.1.1.2
binning parameters	differential coverage and tetranucleotide frequency
binning software	anvi'o;7.0
completeness score	94.37
completeness software	anvi'o;7.0
contamination score	1.41
geographic location (latitude)	-67.6009
geographic location (longitude)	-67.20748333
geographic location (region and locality)	Pourquoi Pas Island
local environmental context	sediment
metagenomic source	microbial mat metagenome
sample derived from	ERS14574361
scientific_name	uncultured cyanobacterium
sequencing method	Illumina
taxonomic identity marker	multi-marker