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MIGS Cultured Bacterial/Archaeal sample from Aggregatibacter segnis ATCC 33393

Identifiers
BioSample: SAMN00210783; SRA: SRS172377
Organism
Aggregatibacter segnis ATCC 33393
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter; Aggregatibacter segnis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size1992000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project nameAggregatibacter segnis ATCC 33393
geographic locationnot determined
source material identifiersATCC 33393
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainATCC 33393
culture collectionATCC:33393
isolation sourceoral cavity
finishing strategy (depth of coverage)Level 2: High-Quality Draft40.36x;19
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.3-04192010
misc_param: HMP supersiteoral
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-Paired-end
Description

Aggregatibacter segnis str. ATCC 33393

Keywords: GSC:MIxS;MIGS:4.0

Links
Homo sapiens Microbiome Project at Baylor College of Medicine
BioProject
PRJNA53019 Aggregatibacter segnis ATCC 33393
Retrieve all samples from this project

Submission
BCM; 2011-02-09
Accession:
SAMN00210783
ID:
210783

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