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MIGS Cultured Bacterial/Archaeal sample from Gardnerella vaginalis ATCC 14019

Identifiers
BioSample: SAMN00001462; Sample name: BCM-HMP0016; SRA: SRS001927
Organism
Gardnerella vaginalis ATCC 14019
cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella; Gardnerella vaginalis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainATCC 14019
estimated size1667000
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersATCC 14019
project nameGardnerella vaginalis 317, ATCC 14019
misc_param: HMP supersiteurogenital_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 5: Non-contiguous Finished88.88x
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-GS-FLX, 454-Paired-end
assemblyNewbler/1.1.03.24
misc_param: HMP body siteVaginal
Description

Gardnerella vaginalis ATCC 14019

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProject
PRJNA31473 Gardnerella vaginalis ATCC 14019
Retrieve all samples from this project

Submission
BCM; 2009-01-08
Accession:
SAMN00001462
ID:
1462

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