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MIGS Cultured Bacterial/Archaeal sample from Pasteurella dagmatis ATCC 43325

Identifiers
BioSample: SAMN00120578; SRA: SRS121479
Organism
Pasteurella dagmatis ATCC 43325
cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella; Pasteurella dagmatis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size2246000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
project namePasteurella dagmatis ATCC 43325
geographic locationnot determined
source material identifiersATCC 43325, NCTC 11617
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
environmental packagemissing
strainATCC 43325
culture collectionATCC:43325
isolation sourcemissing
finishing strategy (depth of coverage)Level 3: Improved-High-Quality Draft29.13x;29
project_typeReference Genome
misc_param: HMP body siteNasal
nucleic acid extractionnot determined
assemblyNewbler v. 2.0.0-Eclipse
misc_param: HMP supersiteairways
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-Paired-end
Description

Pasteurella dagmatis strain ATCC 43325

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine
BioProject
PRJNA40085 Pasteurella dagmatis ATCC 43325
Retrieve all samples from this project

Submission
BCM; 2010-11-19
Accession:
SAMN00120578
ID:
120578

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