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MIGS Cultured Bacterial/Archaeal sample from Sphingobacterium spiritivorum ATCC 33861

Identifiers
BioSample: SAMN00001488; Sample name: BCM-HMP0015; SRA: SRS001953
Organism
Sphingobacterium spiritivorum ATCC 33861
cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium; Sphingobacterium spiritivorum
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainATCC 33861
estimated size5082000
culture collectionATCC:33861
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersATCC 33861, CDC E7288, JCM 1277, NCTC 11386
project nameSphingobacterium spiritivorum ATCC 33861
isolation sourcemissing
misc_param: HMP supersiteurogenital_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 3: Improved-High-Quality Draft28.49x;15
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-GS-FLX
assemblyNewbler v. 1.1.02.12
misc_param: HMP body siteVaginal
Description

Sphingobacterium spiritivorum ATCC 33861

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProject
PRJNA31531 Sphingobacterium spiritivorum ATCC 33861
Retrieve all samples from this project

Submission
BCM; 2009-01-09
Accession:
SAMN00001488
ID:
1488

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