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MIGS Cultured Bacterial/Archaeal sample from Lactobacillus jensenii JV-V16

Identifiers
BioSample: SAMN00001502; Sample name: BCM-HMP0030; SRA: SRS001976
Organism
Lactobacillus jensenii JV-V16
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus jensenii
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainJV-V16
estimated size1601000
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersBEI HM-105
project nameLactobacillus jensenii JV-V16
isolation sourcemissing
misc_param: HMP supersiteurogenital_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 6: Finished65.45x;2
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-GS-FLX, Illumina
assemblyNewbler v. 1.1.03.24
misc_param: HMP body siteVaginal
Description

Lactobacillus jensenii JVV16

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProject
PRJNA31493 Lactobacillus jensenii JV-V16
Retrieve all samples from this project

Submission
BCM; 2009-01-15
Accession:
SAMN00001502
ID:
1502

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