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MIGS Cultured Bacterial/Archaeal sample from Parascardovia denticolens DSM 10105

Identifiers
BioSample: SAMN02299441; Sample name: 50509
Organism
Parascardovia denticolens DSM 10105 = JCM 12538
cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Parascardovia; Parascardovia denticolens
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
environmental packagemissing
investigation typebacteria_archaea
strainDSM 10105
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
collection datenot determined
environment featurehuman-associated habitat [ENVO:00009003]
geographic locationnot determined
environment materialbiological product [ENVO:02000043]
project nameParascardovia denticolens DSM 10105
hostHomo sapiens
host taxonomy ID9606 (9606)
estimated size1891000
source material identifiersDSM 10105
isolation and growth conditionnot determined
number of repliconsnot determined
reference for biomaterialnot determined
culture collectionDSM:10105
isolation sourceoral cavity
project_typeReference Genome
misc_param: HMP supersiteoral
misc_param: HMP body sitenot determined
finishing strategy (depth of coverage)Level 5: Non-contiguous Finished99.8x;2
sequencing method454-Paired-end
assemblyNewbler v2.3-04192010
nucleic acid extractionnot determined
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Keywords: GSC:MIxS;MIGS:4.0

BioProject
PRJNA50509 Parascardovia denticolens DSM 10105 = JCM 12538
Retrieve all samples from this project

Submission
University of Maryland School of Medicine, Institute for Genome Sciences, Lynn Schriml; 2013-08-02
Accession:
SAMN02299441
ID:
2299441

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