Covid01_050520_ROI_017_well_B06 - BioSample - NCBI

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Covid01_050520_ROI_017_well_B06

Identifiers: BioSample: SAMN18471490; SRA: SRS8566892; GEO: GSM5207306

Organism: Homo sapiens (human)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo

Attributes

source name	FFPE Rapid Autopsy Tissue
tissue	Alveolar
virus	yes
patient id	1. Covid01
roi number	017
segment type	Geometric Segment
condition	Covid-19_High
roi x coordinate	122.744
roi y coordinate	39.652
rawreads	3109090
trimmedreads	3103041
stitchedreads	3002529
alignedreads	2946853
deduplicatedreads	420681
sequencingsaturation	85.7243981969918
notes	Aveolar Zone with Type 2 Hyperplasia

Links: GEO Sample GSM5207306

BioProject: PRJNA716949 Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps
Retrieve all samples from this project

Submission: Translational Sciences, NanoString Technologies, Inc., Tyler Hether; 2021-03-24

Accession:: SAMN18471490
ID:: 18471490

BioProject SRA GEO DataSets

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