MIGS Cultured Bacterial/Archaeal sample from Alter... - BioSample

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Identifiers: BioSample: SAMN06924978; Sample name: Alteromonas sp. strain 5.12

Organism: Alteromonas pelagimontana
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas

Attributes

strain	5.12
isolation source	sediment
collection date	2015-11-13
geographic location	Indian Ocean
sample type	bacterial species
temperature	5–40 °C (optimum at 35 °C)
salinity	0–10% (optimum at 3.5%)
investigation type	bacteria_archaea
project name	Complete genome sequence of Alteromonas pelagimontana 5.12
latitude and longitude	26.76 S 67.71 E
broad-scale environmental context	marine benthic biome [ENVO:01000024]
local-scale environmental context	marine sediment [ENVO:03000033]
environmental medium	deep marine sediment [ENVO:00002113]
environmental package	Sediment
depth	2681 m
elevation	2681 m
number of replicons	1
observed biotic relationship	free living
trophic level	heterotroph
sample collection device or method	Sediment grab sampler
isolation and growth condition	PMID: 28905702
reference for biomaterial	PMID: 28905702
type-material	type strain of Alteromonas pelagimontana
Gram stain	Negative
Motility	Motile
pH range	6.0 to 10.0 (optimum 6.0)
Cell shape	Short rods
Colony color	Pale yellow
Submitted_to_NCBI	CP052766
Seq_meth	Illumina Miseq and Minion Oxford Nanopore
Lib_const_meth	Paired-end
Assembly method	Hybrid assembly of Illumina MiSeq and Minion Oxford Nanopore reads
Assembly_name	MaSuRCA v. 3.2.8
Finishing_strategy	Complete; over 100 fold genome coverage; 1 contig

BioProject: PRJNA386068 Alteromonas pelagimontana strain:5.12
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MIGS Cultured Bacterial/Archaeal sample from Alteromonas pelagimontana
MIGS Cultured Bacterial/Archaeal sample from Alteromonas pelagimontana

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Alteromonas pelagimontana BD-ID 140746 [BacDive]
Alteromonas pelagimontana BD-ID 140746
BacDive