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Pseudomonas veronii R02 isolated from potato rhizosphere

Identifiers
BioSample: SAMN06076152; Sample name: PverR02; SRA: SRS1828441
Organism
Pseudomonas veronii
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group
Package
Microbe; version 1.0
Attributes
strainR02
hostSolanum tuberosum
isolation sourcerhizosphere soil
collection date2012-10
geographic locationSwitzerland: Zurich
sample typewhole organism
broad-scale environmental contextThe narrow region of soil that is directly influenced by root secretions and associated soil microorganisms
latitude and longitude47.428808 N 8.516594 E
local-scale environmental contextagricultural soil
Description

This study aims at characterizing the impact of the plant microbiome on crop protection against diseases. To this end, the microbiomes of both roots and shoots of field-grown potato plants were isolated, characterized and screened for their protective effects against major potato diseases. A subsample of these bacterial strains, including Pseudomonas veronii R02, belonging to the genus Pseudomonas, showed volatile-mediated inhibition of the late blight causing agent Phytophthora infestans. Comparative genomics on Pseudomonas strains differing in their impact on P. infestans shall provide insight into the molecular determinants underlying the protective effect of the potato microbiome against late blight and open new ways for sustainable crop protection.

BioProject
PRJNA355625 Pseudomonas
Retrieve all samples from this project

Submission
University of Applied Sciences and Arts Western Switzerland, Laure Weisskopf; 2016-11-30
Accession:
SAMN06076152
ID:
6076152

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