Complete genome of Mariprofundus micogutta strain ... - BioSample

Complete genome of Mariprofundus micogutta strain CP-5

Identifiers: BioSample: SAMN06046392; Sample name: Chesapeake 2014 CTD12-5; SRA: SRS1814648

Organism: Mariprofundus aestuarium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Candidatius Mariprofundia; Mariprofundales; Mariprofundaceae; Mariprofundus

Package: MIGS: cultured bacteria/archaea, water; version 6.0

Attributes

strain	CP-5
collection date	2014-08
depth	11.4 m
broad-scale environmental context	estuarine biome
local-scale environmental context	bay
environmental medium	coastal water
geographic location	USA: Chesapeake Bay
isolation and growth condition	16260287
latitude and longitude	38.9767 N 76.368 W
number of replicons	1
reference for biomaterial	Publication in Prep
observed biotic relationship	free living
dissolved oxygen	0.9 micromolar
estimated size	2.54 Mb
isolation source	water column oxic-anoxic transition zone
oxygenation status of sample	aerobic
pH	7.4
relationship to oxygen	microaerophilic
salinity	17 ppt
sample collection device or method	CTD
sulfide	0 micromolar
temperature	25.3 degrees celsius
trophic level	chemolithoautotroph
Fe(II) Total	1.36 micromolar
Fe(II) Total Standard Deviation	0.07 micromolar
Fe(II) Dissolved and Nanoparticulate	0.41 micromolar
Fe(II) Dissolved and Nanoparticulate Standard Deviation	0.03 micromolar
Fe(III) Total	0.14 micromolar
Fe(III) Total Standard Deviation	0.04 micromolar
Fe(III) Dissolved and Nanoparticulate	0.06 micromolar
Fe(III) Dissolved and Nanoparticulate Standard Deviation	0.02 micromolar
type-material	type strain of Mariprofundus aestuarium

Description

Zetaproteobacteria, a class of marine neutrophilic iron-oxidizing bacteria (FeOB), have recently begun to be recognized in coastal environments. Here we present the genome of Mariprofundus micogutta strain CP-5. Isolated from the oxic-anoxic transition zone of the Chesapeake Bay during seasonal stratification, this chemolithoautotroph produces bundles of iron-oxide dread structures, and is novel for its planktonic lifestyle.

Keywords: GSC:MIxS;MIGS:6.0

BioProject: PRJNA354470 Mariprofundus strain:CP-5 and CP-8
Retrieve all samples from this project

Submission: University of Delaware, Sean McAllister; 2016-11-21

Accession:: SAMN06046392
ID:: 6046392

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Complete genome of Mariprofundus micogutta strain CP-5

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