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Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Dublin

Identifiers: BioSample: SAMN03894186; Sample name: CVM N45955; SRA: SRS1102152

Organism: Salmonella enterica subsp. enterica serovar Dublin
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica

Package: Pathogen: environmental/food/other; version 1.0

Attributes

geographic location	USA: OR
strain	CVM N45955
collection date	2013
isolation source	ground turkey
serovar	Dublin
collected by	FDA
latitude and longitude	missing
sub species	enterica
AssemblyVersion	CLC Genomics Workbench v. 6.0.2
SequencingTechnology	Illumina MiSeq

BioProjects: PRJNA448882 Salmonella enterica
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PRJNA292661 Salmonella enterica
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PRJNA242614 Salmonella enterica
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Submission: FDA, CVM FDA; 2015-07-22

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amoxicillin-clavulanic acid	resistant	>	32/16	mg/L	MIC				CLSI
ampicillin	resistant	>	32	mg/L	MIC				CLSI
azithromycin	susceptible	==	4	mg/L	MIC				NARMS
cefoxitin	resistant	>	32	mg/L	MIC				CLSI
ceftiofur	resistant	==	8	mg/L	MIC				CLSI
ceftriaxone	resistant	==	16	mg/L	MIC				CLSI
chloramphenicol	resistant	>	32	mg/L	MIC				CLSI
ciprofloxacin	susceptible	==	0.06	mg/L	MIC				CLSI
gentamicin	susceptible	==	1	mg/L	MIC				CLSI
kanamycin	resistant	>	64	mg/L	MIC				CLSI
nalidixic acid	susceptible	==	4	mg/L	MIC				CLSI
streptomycin	resistant	>	64	mg/L	MIC				NARMS
sulfisoxazole	resistant	>	256	mg/L	MIC				CLSI
tetracycline	resistant	>	32	mg/L	MIC				CLSI
trimethoprim-sulfamethoxazole	resistant	==	4/76	mg/L	MIC				CLSI

Accession:: SAMN03894186
ID:: 3894186

BioProject SRA Nucleotide

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