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MIGS Cultured Bacterial/Archaeal sample from Bacteroides capillosus ATCC 29799

Identifiers
BioSample: SAMN00627059; Sample name: Sample BPAC-454_060823_TUBE1; SRA: SRS211910
Organism
Pseudoflavonifractor capillosus ATCC 29799
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; unclassified Clostridiales; Pseudoflavonifractor; Pseudoflavonifractor capillosus
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size4242000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
investigation typemissing
environment featurehuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project namePseudoflavonifractor capillosus ATCC 29799
geographic locationnot determined
source material identifiersATCC 29799
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainATCC 29799
environmental packagemissing
isolation sourcemissing
finishing strategy (depth of coverage)Level 3: Improved-High-Quality Draft8.2x;155
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler, PCAP
misc_param: HMP supersitegastrointestinal_tract
sequencing methodSanger, 454-GS20
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

454 sequencing of Bacteroides capillosus ATCC 29799

Keywords: GSC:MIxS;MIGS:4.0

BioProject
PRJNA18173 Pseudoflavonifractor capillosus ATCC 29799
Retrieve all samples from this project

Submission
WUGSC; 2011-06-14
Accession:
SAMN00627059
ID:
627059

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