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MIGS Cultured Bacterial/Archaeal sample from Holdemania filiformis DSM 12042

Identifiers
BioSample: SAMN00008830; Sample name: 46929; SRA: SRS010451
Organism
Holdemania filiformis DSM 12042
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania; Holdemania filiformis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
collection datenot determined
estimated size3804000
isolation and growth conditionnot determined
hostHomo sapiens
latitude and longitudenot determined
environment biometerrestrial biome [ENVO:00000446]
investigation typemissing
environment featurehuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
project nameHoldemania filiformis VPI J1-31B-1, DSM 12042
geographic locationnot determined
source material identifiersDSM 12042, ATCC 51649
environment materialbiological product [ENVO:02000043]
reference for biomaterialnot determined
number of repliconsnot determined
strainDSM 12042
environmental packagemissing
culture collectionDSM:12042
isolation sourcemissing
finishing strategy (depth of coverage)Level 2: High-Quality Draft18.2x;289
project_typeReference Genome
misc_param: HMP body sitenot determined
nucleic acid extractionnot determined
assemblyNewbler v. 2.0.00.20
misc_param: HMP supersitegastrointestinal_tract
sequencing method454-GS-FLX
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
Description

Holdemania filiformis strain DSM 12042

Keywords: GSC:MIxS;MIGS:4.0

BioProject
PRJNA30361 Holdemania filiformis DSM 12042
Retrieve all samples from this project

Submission
WUGSC; 2010-02-19
Accession:
SAMN00008830
ID:
8830

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