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MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecalis HH22

Identifiers
BioSample: SAMN00002227; Sample name: BCM-HMP0087; SRA: SRS002515
Organism
Enterococcus faecalis EnGen0297
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus faecalis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
hostHomo sapiens
environment featurehuman-associated habitat [ENVO:00009003]
host taxonomy ID9606 (9606)
isolation sourcemissing
project nameEnterococcus faecalis HH22
source material identifiersBEI HM-200
reference for biomaterialnot determined
collection datenot determined
environment materialbiological product [ENVO:02000043]
geographic locationnot determined
latitude and longitudenot determined
environmental packagemissing
environment biometerrestrial biome [ENVO:00000446]
isolation and growth conditionnot determined
estimated size3050000
strainHH22
number of repliconsnot determined
investigation typebacteria_archaea
sequencing method454-GS-FLX, Illumina, Sanger
nucleic acid extractionnot determined
misc_param: HMP supersiteurogenital_tract
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
project_typeReference Genome
finishing strategy (depth of coverage)Level 2: High-Quality Draft23.38x;307
assemblyNewbler v. 2.0.0-01162009
misc_param: HMP body siteUrinary tract
Description

Enterococcus faecalis HH22

Keywords: GSC:MIxS;MIGS:4.0

Links
Human Microbiome Project at Baylor College of Medicine
BioProject
PRJNA31457 Enterococcus faecalis EnGen0297 strain:HH22
Retrieve all samples from this project

Submission
BCM; 2009-04-14
Accession:
SAMN00002227
ID:
2227

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