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MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecalis TX1322

Identifiers
BioSample: SAMN00001498; Sample name: BCM-HMP0086; SRA: SRS001972
Organism
Enterococcus faecalis TX1322
cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus faecalis
Package
MIGS: cultured bacteria/archaea; version 4.0
Attributes
strainTX1322
estimated size2930000
environment featureHomo sapiens-associated habitat [ENVO:00009003]
investigation typemissing
host taxonomy ID9606 (9606)
environment materialbiological product [ENVO:02000043]
number of repliconsnot determined
reference for biomaterialnot determined
geographic locationnot determined
environment biometerrestrial biome [ENVO:00000446]
latitude and longitudenot determined
environmental packagemissing
collection datenot determined
hostHomo sapiens
isolation and growth conditionnot determined
source material identifiersBEI HM-202
project nameEnterococcus faecalis TX1322
isolation sourcemissing
misc_param: HMP supersitegastrointestinal_tract
project_typeReference Genome
nucleic acid extractionnot determined
finishing strategy (depth of coverage)Level 3: Improved-High-Quality Draft27.65x;116
sophttp://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method454-GS-FLX, Illumina, Sanger
assemblyNewbler v. 1.1.02.15
misc_param: HMP body sitenot determined
Description

Enterococcus faecalis TX1322

Keywords: GSC:MIxS;MIGS:4.0

Links
BCM HMP Project
BioProject
PRJNA31461 Enterococcus faecalis TX1322
Retrieve all samples from this project

Submission
BCM; 2009-01-14
Accession:
SAMN00001498
ID:
1498

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