MIGS Cultured Bacterial/Archaeal sample from Esche... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00001495; Sample name: BCM-HMP0013; SRA: SRS001965

Organism: Escherichia coli 83972
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli

Attributes

strain	83972
estimated size	5066000
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
environmental medium	biological product [ENVO:02000043]
number of replicons	not determined
reference for biomaterial	not determined
geographic location	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
latitude and longitude	not determined
environmental package	missing
collection date	not determined
host	Homo sapiens
isolation and growth condition	not determined
source material identifiers	BEI HM-50
project name	Escherichia coli 83972
isolation source	missing
misc_param: HMP supersite	urogenital_tract
project_type	Reference Genome
nucleic acid extraction	not determined
finishing strategy (depth of coverage)	Level 5: Non-contiguous Finished30.16x;159
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf
sequencing method	454, Sanger, Illumina
assembly	Newbler v. 1.1.03.19
misc_param: HMP body site	Urinary tract