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Propionibacterium freudenreichii ssp. shermanii JS genome annotation project

Identifiers
BioSample: SAMEA3716040; SRA: ERS1023189
Organism
Propionibacterium freudenreichii subsp. shermanii
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae; Propionibacterium; Propionibacterium freudenreichii
Attributes
sample namePFREUDJS1
sub speciesshermanii
ENA first public2016-04-19
ENA last update2015-12-17
ENA-CHECKLISTERC000011
External IdSAMEA3716040
INSDC center aliasInstitute of Biotechnology, Univerity of Helsinki
INSDC center nameInstitute of Biotechnology, Univerity of Helsinki
INSDC first public2016-04-19T17:03:15Z
INSDC last update2015-12-17T12:58:17Z
INSDC statuspublic
Submitter IdPFREUDJS1
Description

Propionibacterium freudenreichii is an important starter culture used in the manufacture of Swiss-type cheeses. The complete genome sequence of a Propionibacterium freudenreichii ssp. shermanii strain JS was generated at the Institute of Biotechnology, University of Helsinki, by using a combination of 454 pyrosequencing with GS FLX and GS FLX Titanium series reagents (Roche) and SOLiD 4 (Life Technologies), ABI 3130xl Genetic Analyzer (Life Technologies), and PacBio RS II (Pacific Biosciences) instruments. Initial genome annotation was carried out using RAST, and additional functional annotation information for each CDS was obtained from BLANNOTATOR, CDD, and KAAS.

BioProject
PRJEB12148 Propionibacterium freudenreichii ssp. shermanii JS genome annotation project
Retrieve all samples from this project

Submission
EBI; 2016-04-20
Accession:
SAMEA3716040
ID:
4871970

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