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Circular MAG for Candidatus Electronema halotolerans

Identifiers
BioSample: SAMEA14373291; SRA: ERS11967999
Organism
Candidatus Electronema halotolerans
cellular organisms; Bacteria; Thermodesulfobacteriota; Desulfobulbia; Desulfobulbales; Desulfobulbaceae; Candidatus Electronema
Attributes
collection date2021
broad-scale environmental contextaquatic biome
local-scale environmental contextbrackish
environmental mediumsediment
geographic locationDenmark
investigation typemetagenome-assembled genome
isolation sourceBrackish water sediment
project nameRecovery of cable bacteria and associate genomes
sample nameLOGT-cMAG
ENA-CHECKLISTERC000011
INSDC center nameCenter for Microbial Communities
Submitter IdLOGT-cMAG
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly softwaremetaFlye;2.9;nano-hq
binning parametersEnsemble binning using coverage and kmer
binning softwareMetaBAT2, Vamb, MaxBin2, metaBinner, DAS Tool
completeness score94.05
completeness softwarecheckm
contamination score3.27
geographic location (latitude)not provided
geographic location (longitude)not provided
metagenomic sourcesediment metagenome (Taxon: 749907)
sample derived fromERS11891752,ERS11891753
scientific_nameCandidatus Electronema halotolerans
sequencing methodNanopore,Illumina
taxonomic identity markermulti-marker approach
Description

Circular MAG for Candidatus Electronema halotolerans from brackish water sediment (Logten)

BioProject
PRJEB52550 Recovery of cable bacteria genomes from metagenomic samples
Retrieve all samples from this project

Submission
EBI; 2022-10-27
Accession:
SAMEA14373291
ID:
31477114

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