Metagenome-assembled genome: ERR1995203_bin.22_CON... - BioSample

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Result Filters

Organism: uncultured Chromatiaceae bacterium
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales; Chromatiaceae; environmental samples

Attributes

collection date	2016-06-22
broad-scale environmental context	Engineered
local-scale environmental context	Engineered
environmental medium	Engineered
geographic location	USA
investigation type	metagenome-assembled genome
isolation source	metagenome
project name	Plastic associated metagenomes from LMFS.
sample name	ERR1995203_bin.22_CONCOCT_v1.1_MAG
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2023-01-03
ENA-LAST-UPDATE	2023-01-03
External Id	SAMEA14081617
INSDC center alias	EBI
INSDC center name	European Bioinformatics Institute
INSDC first public	2023-01-03T00:32:45Z
INSDC last update	2023-01-03T00:32:45Z
INSDC status	public
Submitter Id	ERR1995203_bin.22_CONCOCT_v1.1_MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	unknown v0.0
binning parameters	Default
binning software	CONCOCT v1.1
broker name	EMG broker account, EMBL-EBI
completeness score	84.21
completeness software	CheckM
contamination score	3.91
geographic location (latitude)	27.542
geographic location (longitude)	-97.286
metagenomic source	metagenome
sample derived from	SAMEA4461982
scientific_name	uncultured Chromatiaceae bacterium
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run ERR1995203 of study ERP017130.