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Monkeypox virus: Genome sequencing

Identifiers
BioSample: SAMEA120121339; SRA: ERS26770799
Organism
Monkeypox virus
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Orthopoxvirus monkeypox
Attributes
collection date2025-05-15
geographic locationSierra Leone
host common namenot provided
host health statenot provided
host sexnot provided
host subject idnot provided
isolate946_S18
sample namePP_0033TAC:mpox:Pathoplexus
ENA first public2025-09-05
ENA-CHECKLISTERC000011
INSDC center nameCentral Public Health Reference Laboratory
INSDC statuspublic
Submitter IdPP_0033TAC:mpox:Pathoplexus
authorsCampbell, Allan K. O.; Parker, Edyth; Omah, Ifeanyi; Miller, Choe; Campbell, Julian; Folorunso, Vidalyn; Daniel-Sesay, Naomi; Williams, Anu J.; Mani, Sia; Lansana, Roberta; Kargbo, Amanda; Koninga, Komba; Adi, Harry; Ruhweza, Simon; James, Abu; Greene, Jonathan; Forster, Monique; Klena, John; Gigante, Crystal; Park, Danny; Kebede, Abebaw; Tanui, Collins; Tessema, Sofonias; Kebede, Yenew; Koroma, Aminata; Njai, Alhaji; Kanu, Joseph; Boie, Mohamed; Happi, Christian; Wurie, Isatta; Sabeti, Pardis; Koroma, Zikan; Harding, Doris; Squire, James; Vandi, Mohamed Alex; Sahr, Foday
broker namePathoplexus
collecting institutionCentral Public Health Reference Laboratory, National Public Health Agency (NPHA) Sierra Leone, Africa Centers for Disease Control and Prevention, U.S. Centers for Disease Control and Prevention, World Health Organization, The Broad Institute of MIT and Harvard Cambridge MA USA, Institute of Genomics and Global Health Redeemer's University Ede Osun State Nigeria, College of Medicine and Allied Health Sciences
collector namenot provided
geographic location (region and locality)Western-Area-Rural
hospitalisationfalse
scientific_nameMonkeypox virus
Description

Automated upload of Monkeypox virus sequences submitted by Central Public Health Reference Laboratory from Pathoplexus

BioProject
PRJEB90072 Monkeypox virus: Genome sequencing by Central Public Health Reference Laboratory, Central Public Health Reference Laboratory
Retrieve all samples from this project

Submission
EBI; 2025-09-06
Accession:
SAMEA120121339
ID:
51182926

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