U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114827946; SRA: ERS17252813
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2020-08-03
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD09206.bin.1.2
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114827946
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T10:00:12Z
INSDC statuspublic
Submitter IdMFD09206.bin.1.2
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score100
completeness softwareCheckM2
contamination score1.44
geographic location (latitude)56.90236
geographic location (longitude)10.25672
local environmental contextNatural grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381702
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114827946
ID:
45986629

Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...