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MAG for uncultured Acidobacteriota bacterium

Identifiers
BioSample: SAMEA114820295; SRA: ERS17245162
Organism
uncultured Acidobacteriota bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; environmental samples
Attributes
broad-scale environmental contextForests
collection date2021-09-21
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD04967.bin.1.58
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114820295
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:48Z
INSDC statuspublic
Submitter IdMFD04967.bin.1.58
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score100
completeness softwareCheckM2
contamination score1.12
geographic location (latitude)54.8533
geographic location (longitude)10.5207
local environmental contextTemperate forests
metagenomic sourcesoil metagenome
sample derived fromERS14381608
scientific_nameuncultured Acidobacteriota bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Acidobacteriota bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114820295
ID:
45984137

Nucleotide

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