U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAG for uncultured Alphaproteobacteria bacterium

Identifiers
BioSample: SAMEA114814347; SRA: ERS17239214
Organism
uncultured Alphaproteobacteria bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; environmental samples
Attributes
broad-scale environmental contextGrassland formations
collection date2020-08-15
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD03399.bin.c.4
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114814347
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:29Z
INSDC statuspublic
Submitter IdMFD03399.bin.c.4
assembly qualitySingle contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score98.98
completeness softwareCheckM2
contamination score0.03
geographic location (latitude)57.18586
geographic location (longitude)9.77493
local environmental contextSemi-natural dry grasslands
metagenomic sourcesoil metagenome
sample derived fromERS14381603
scientific_nameuncultured Alphaproteobacteria bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Alphaproteobacteria bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114814347
ID:
45973303

Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...