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MAG for uncultured Acidimicrobiia bacterium

Identifiers
BioSample: SAMEA114810144; SRA: ERS17235011
Organism
uncultured Acidimicrobiia bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; environmental samples
Attributes
broad-scale environmental contextDunes
collection date2020-04-28
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD01275.bin.1.78
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114810144
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:59:02Z
INSDC statuspublic
Submitter IdMFD01275.bin.1.78
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score94.99
completeness softwareCheckM2
contamination score1.47
geographic location (latitude)56.5332
geographic location (longitude)10.8089
local environmental contextSea dunes
metagenomic sourcesoil metagenome
sample derived fromERS16252356
scientific_nameuncultured Acidimicrobiia bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Acidimicrobiia bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114810144
ID:
45975440

Nucleotide

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