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MAG for uncultured Acidobacteriaceae bacterium

Identifiers
BioSample: SAMEA114809710; SRA: ERS17234577
Organism
uncultured Acidobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Acidobacteriota; Terriglobia; Terriglobales; Acidobacteriaceae; environmental samples
Attributes
broad-scale environmental contextBogs, mires and fens
collection date2020-05-20
environmental mediumnot collected
geographic locationDenmark
isolation sourcesoil
project nameMicroflora Danica
sample nameMFD01188.bin.1.51
ENA first public2024-12-25
ENA-CHECKLISTERC000011
External IdSAMEA114809710
INSDC center nameCenter for Microbial Communities
INSDC last update2023-12-07T09:58:59Z
INSDC statuspublic
Submitter IdMFD01188.bin.1.51
assembly qualityMultiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
binning parametersEnsemble iterative binning using coverage and kmer
binning softwareMetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
completeness score97.82
completeness softwareCheckM2
contamination score1.07
geographic location (latitude)55.123677
geographic location (longitude)10.271228
local environmental contextSphagnum acid bogs
metagenomic sourcesoil metagenome
sample derived fromERS15928273
scientific_nameuncultured Acidobacteriaceae bacterium
taxonomic identity markermulti-marker approach
Description

HQ MAG for uncultured Acidobacteriaceae bacterium, recovered from an environmental sample from Denmark

Submission
EBI; 2024-12-26
Accession:
SAMEA114809710
ID:
45971623

Nucleotide

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